Bombus vancouverensis nearcticus: 117163043
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Entry
117163043 CDS
T07628
Name
(RefSeq) protein SMG9 isoform X1
KO
K18735
protein SMG9
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117163043
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117163043
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
DUF6498
Ploopntkinase3
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117163043
NCBI-ProteinID:
XP_033200894
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MNIQKMLPIATKDLETKDGDSRGTIKVIDRPTFILKTREGENRAVSPNQRNGGNKKQGDT
SSNASSKIQDPIRTVLSTCPEMTSCVKFMDENMQLCESPLEFLYDQQDFLVVGCLGAQGV
GKSTIMSFLTSNIASGIFPTQDTMHHESGANCTIGIDFFVTKNRVIYLDTQPILSGSTID
YSTCYDQKKSTTDFINTETNLELQSLQFAAFLFSVCHIIIFVQDWFVDPNLVRFLQTAEM
LKPSSTSNMDQDYVEYYPHIVFLHNKAELQDLTPHSMENVKEFYGKLFSSSRLQIHSGLD
MSNHSMEAGLNLFFIPRIVNEEEVTIRQNEKKLIEKLKTKIHGVTRNPMTPSTLTEKDWY
HYVSRVMEAIKKSHLSSEYGRLMP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacaaaaaatgctaccaattgcaacaaaagatttagaaactaaggatggtgat
agcagaggcacaattaaagttatagaccgtccaacattcatattgaaaacgagagaaggc
gagaacagagctgtgtcaccaaatcaacgcaatggtggtaacaagaaacagggtgataca
tcttccaacgcttcatcaaagatacaggatccaattcgtactgtactgtctacgtgtcct
gaaatgacaagttgtgtaaaatttatggatgaaaatatgcaactttgtgagagccctctt
gaattcctatatgatcaacaagattttttagttgtaggatgcttaggggctcaaggtgtt
ggaaaatcaactataatgtcctttttaacatctaatattgcgtctggcatatttccaact
caagatacaatgcatcatgaaagtggtgcaaattgcactattggtattgacttttttgta
acaaaaaatcgagtaatatatctggatacacaacccatactctcaggatctactatagat
tactctacatgttatgatcaaaaaaaatctacgacagattttataaatacagaaactaat
ttagagctgcaatctttacaatttgcagcatttctcttttcagtttgtcacattatcata
tttgtacaagattggtttgttgatccaaatttagttaggtttttacaaactgcggaaatg
ttaaaaccatcctcgactagcaatatggatcaagattatgttgaatactatcctcatatt
gtattcttacacaataaagctgaattacaagatctcacgcctcacagtatggaaaatgtg
aaagaattttatggcaaattattctccagttctagattacaaatccatagtggtttggat
atgagtaatcattctatggaggcaggtttaaatttgttttttatacctcgtattgtaaac
gaagaagaagttacaatacgccagaacgagaaaaagctaatagaaaaactaaaaacaaag
atacatggtgtcaccaggaatccaatgacaccatctaccttaacagaaaaagattggtac
cactatgtttcaagagtgatggaagcaattaaaaaaagtcacctttcctccgaatatggg
agattaatgccataa
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