KEGG   Bombus vancouverensis nearcticus: 117163221
Entry
117163221         CDS       T07628                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117163221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bvan03019]
    117163221
Messenger RNA biogenesis [BR:bvan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117163221
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     117163221
SSDB
Motif
Pfam: CAF1 YceM-like_C
Other DBs
NCBI-GeneID: 117163221
NCBI-ProteinID: XP_033201187
LinkDB
Position
Unknown
AA seq 302 aa
MPSATGGNNPIGQQKGGATMPSNEECGIRDVWGHNLEEEFRTIRQVVQQYQYIAMDTEFP
GVVARPIGEFRTSADYQYQLLRCNVDLLRIIQLGLTFLDESGNTPGGSYTTWQFNFKFNL
QEDMYAQDSIDMLQNSGIQFKKHEEEGIDPLDFAELLMTSGIVLVDDIKWLSFHSGYDFG
YLLKLLTDQNLPQEESEFFELLRIYFPTIYDVKYLMKSCKNLKGGLQEVAEQLEIQRVGP
QHQAGSDSLLTGMVFFKMREMFFEDNIDDAKYCGHLYGLGTSFVVNGSGGYLDSNGDNSS
SS
NT seq 909 nt   +upstreamnt  +downstreamnt
atgccctcagctaccggaggaaataaccccatagggcaacagaagggtggggcgactatg
cccagtaatgaagaatgcgggatccgagatgtttggggacataatctcgaagaagaattt
cgaacaattcggcaagtcgtgcagcagtatcaatatattgcaatggatactgaatttcca
ggagtagttgctagacccattggagaattcaggactagcgccgattatcaatatcagtta
ttacgatgtaatgtagatctcttgcggataatccaacttggtctgacatttctcgacgaa
tcgggaaatacacctggtggtagttataccacatggcaatttaatttcaaattcaattta
caagaggatatgtatgcgcaagatagtatagatatgctacaaaacagtggtatacagttc
aaaaaacacgaagaagagggtattgatccgttagattttgccgaattattgatgacatcg
ggaattgttcttgttgacgacataaaatggctatcctttcattctggttacgattttggc
tatctattgaaacttcttacagatcaaaatttaccccaagaagaaagtgaattcttcgaa
cttcttaggatatattttccaacaatatatgatgtaaaatatttaatgaaatcttgcaaa
aatttgaaaggaggtctacaagaggtagcagagcaattggaaattcaaagagttggtccc
caacatcaggctggttctgattcgttacttacgggaatggttttctttaaaatgcgagag
atgttttttgaagataatattgatgatgcgaaatattgtggccatttatatggtttggga
acatcatttgtcgtaaacggttcaggaggatacctagacagtaatggagataattcttcg
tcttcgtaa

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