Bombus vancouverensis nearcticus: 117163271
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Entry
117163271 CDS
T07628
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03015
mRNA surveillance pathway
bvan03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117163271
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117163271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117163271
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
117163271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
117163271
NCBI-ProteinID:
XP_033201291
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MADGDIDLYADDLEQDFAQIHSKKSKMVLADEFAGDGVDLYDDVIAAPAGGNGGVSTGNS
GDGAGDTTSPNEETNGSAPYHQLGNNIQPNQIGRRHQLYVGNLTWWTSDQDITDAVQSIG
VSDFVEVKFFENRANGQSKGFCVISLGSEQSMRICMERLPKKELHGQNPVVTFPTKQALN
QFESQCKTRPAPAPQQSQSQRPHNPHQHQSPMPPHQQHPQHPQHPQHSQQNHGPRMMMGP
PQGVRPQRMPPPGMGPPGPGGPGQQGPPRMHGPPMGPGPGPHHPLPGHPNQGPPPPGYQQ
GPWNGPRPNGPPGPPRGPSGPGGPPQQGPPGPGPGQHRPPGMSCTRDLSEASYHIPQQFH
GGPPGPPGQGPPRGPPGHPGGPPGDPRGAQPRPEWNRPPGMHHGPQGPPGFPQHQHMQGP
QPGQGPPQRGPPPGSMGGMLPGPGGPPPGHGGPPQGPPQGPPGGPAPHVNPAFFPQGPPH
QHPGQHPPGPPGPPHGPPHGPPHGPPHGPPHGPPHGPPHGQPHVPPHGYGPPAAQPPYGA
PGPDHRPEGPPPLTEQEFEEIMGRNRTVSSSAIARAVSDAAAGEYASAIETLVTAISLIK
QSKVAADDRCKILISSLQDTLRGVETKSYGSARRERSRSRDRERSHRRRRERSRSRDREY
RERSRDRDRERDRERDRERERDRDRDRERYYSEPYPRERSRSRERDRERERDREYRERSR
EESTTRQSARPRVKEEPPETAPVSSSKASRYYDDRYRERERDRDRERESSRRPSEREREP
ERERERERERDRRDERGDSSHRSRH
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgacattgatttgtacgccgacgatctcgagcaagatttcgcgcagatt
cacagcaagaaaagcaaaatggtgttagcggatgaatttgctggtgatggcgttgatttg
tatgatgatgtgatagcagctcctgctggtggtaatggtggcgtttctacgggaaatagt
ggagatggtgctggtgatactacttcaccaaatgaagaaacaaatggtagcgcaccttac
catcaacttggaaataatattcagccaaaccaaattgggagacgtcatcaattatatgtt
ggaaatttgacttggtggacaagtgaccaagatataactgatgctgttcaaagtattggt
gtatcagattttgttgaagtaaaattctttgaaaatcgagccaatggacaatctaaggga
ttctgtgtgatatctttgggatcagaacaaagtatgaggatatgtatggaaagattacct
aaaaaggaattgcatggacagaatccagtagtaacatttccaactaaacaagctttgaat
caatttgagtctcagtgtaagacacgaccagctccggctcctcaacagagtcagagtcag
cgtccccataatccacatcagcatcagtcaccaatgccaccccatcaacagcatccacaa
catccccaacaccctcaacattcgcaacaaaatcatggtcctaggatgatgatgggtcct
ccgcagggtgtacgaccacagagaatgccacctccagggatgggtccaccaggtccgggt
ggacctggccagcaaggtccaccgcgtatgcatggtccgccgatgggtcctggaccggga
ccgcaccatcctttacctgggcatcctaaccaaggtccaccacctcctggttatcagcag
ggcccatggaatgggccaagacctaatggtccacctggaccaccaagaggcccaagtgga
cctggtggtccacctcaacaaggaccaccaggaccaggtcctggtcaacatcggcctcca
ggaatgagttgtactagagacctttcagaagccagttaccatataccacagcaatttcat
ggtggtccgcctggtccacctggtcaaggacctccacgtggtccacctggacatcctggt
ggacctccaggtgatccaagaggtgctcaaccacgtcccgaatggaatagaccaccagga
atgcatcacgggcctcagggaccaccaggtttccctcaacatcaacatatgcaaggcccg
caacctggtcaaggcccaccacagagaggacctcctccaggttctatgggtggaatgtta
ccaggtccaggaggtccaccacctggtcatggtggcccacctcaaggaccaccacaagga
cccccaggaggacctgcaccacatgtgaatccagcatttttcccacaaggaccacctcat
caacatccaggacaacatccaccaggtcctcctggtccaccccatggaccacctcatggt
ccaccacatggtccaccacatggtccacctcatggtccacctcatggtcctccacatggt
caaccacatgtgccacctcatggttatggaccacctgcagcacagccaccttatggcgca
ccaggacctgatcatcgcccagaaggtcctcctccccttacagaacaagaatttgaagaa
atcatgggtagaaatagaaccgtttcttcttctgctattgctcgagcagtatctgatgct
gcagcaggggaatacgcaagcgctatagaaaccctggttacagccatctctttgataaaa
caatccaaggttgctgcagatgatagatgtaaaattttaatcagttctcttcaagacacc
ttgcgcggcgtcgaaacaaagagttatggatccgcacgtagggaacgatcacgttcacga
gacagggaacgcagtcacagaagaagacgtgagcgatcaaggagccgtgacagggaatac
agagaaagaagcagagacagagatagagaacgtgacagggaacgcgatcgtgaaagggaa
agggatcgtgatcgtgacagagaacgttattacagtgaaccatatccacgggagagatca
cgaagcagggagagggatcgtgaacgtgaaagagatcgcgaatatagagagcgaagcaga
gaagaaagtacgacacgtcagtcagccaggccaagagtaaaagaagaaccgccagagacg
gctcccgtctcgtcttccaaggcgtctaggtattatgacgatcgctacagagagcgtgaa
cgagacagagatcgagaacgagagtcgagccgaagaccatccgagagagaacgagaaccg
gagcgtgaacgggagcgagaacgagaaagagatcgtcgcgacgaacgtggagactcttcg
catcgttcaaggcattaa
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