Bombus vancouverensis nearcticus: 117163405
Help
Entry
117163405 CDS
T07628
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04145
Phagosome
bvan04512
ECM-receptor interaction
bvan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117163405
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117163405
09142 Cell motility
04820 Cytoskeleton in muscle cells
117163405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvan04131
]
117163405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bvan04147
]
117163405
00536 Glycosaminoglycan binding proteins [BR:
bvan00536
]
117163405
Membrane trafficking [BR:
bvan04131
]
Endocytosis
Phagocytosis
Opsonins
117163405
Exosome [BR:
bvan04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117163405
Exosomal proteins of colorectal cancer cells
117163405
Exosomal proteins of bladder cancer cells
117163405
Glycosaminoglycan binding proteins [BR:
bvan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117163405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
cEGF
COMP
Motif
Other DBs
NCBI-GeneID:
117163405
NCBI-ProteinID:
XP_033201541
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MHIIASLIFAILFVVYVADCHVKLDKGLTTNLRETWDYNDFVIVALNAKSKKKQSEAAID
ILLAVKYEKSKTKMIFKFDRQTNRIIYEKTNRNGHRTTERLEIQNVNAPWKKIIVFVHQN
KPDPEIDIYVDCIYQGMLHLKESFRKVAENEDDSLVEVFRERRSHVKVYPLLSVSDALKQ
ENCPNYLAGLGTLSDEYKESVESDESIPTSTNDNSDNNSDEFSHEINPPRRKLGNNENST
TETSDTPEDASSLEDFGDSDFKQSSQSKHDHRPVERPEKYHSVSEVETNQEDVSSHVKRS
RQKTRSEYFDGPFYENPMEWNNFGELDPLSQSNLYHKRFPRRGDIGIQSLNEKVCLMDFQ
IVRTLNELIEATRKVWREIELNKLEMRHLRQLIENCAACRVPPVSPMTTAAPPPSCDYKS
PCFPGADCINTPRGPQCGACPPQYTGDGYRCVKISCAHNPCFYGVRCYDRADGYRCGNCP
NGYVGDGKRCERFKGGCEPHSCYPDVKCDPILHPPYFKCGSCPSGFMGNGSTCVDINECE
LAQPCHPGVRCINLHPGFKCESCPPGFAGPIVEGVGLEIAMVRKQICQDINECENNNGGC
DPYMTCINTEGSYRCGTCRTGYVGNQTFGDVNADCICTNTNEYTCRCRVGWAGDGLMCGS
DRDSDGIPDRNLRCHDSRCRMDNCPFIPNTGQEDADRDGLGDACDPDADNDGILNPSDNC
PLVPNPSQEDSDHDSIGDACDNCPLVKNLKQDDTDDDGIGDACDDDIDNDAILNENDNCP
KTKNPDQNDRDMDGIGDACDNCPNIYNEDQLDQDEDGVGDACDNDNDKDRDGVQDDRDNC
PDVMNSGQNDIDHDGIGDECDDDMDNDGVPNSIDNCPYVYNPDQRRTHHENSGDACWNDN
DNDTVKNLLDNCPNNSLIWATDFRKYTTVALDPIGTAQVDPVWVIHHEGAEIQQLYNSDP
GLAIGPDIFSGVDFEGTFFIDDDGDDDYVGFVFSYQDNRRFYVVCWKKGHQPYWMPNPFR
AVGEPGVFLKLVNSDTGPGEFLRNSLWHNEDVPNQVKILWHDPKKIGWKERTPYRWHLLH
RPKIGLIRFRLYQGKQLVADSGNVYDSTLKGGRLGVYCFSQEKITWSNLLYTCKETVPKL
VWNELPANLKKEVNVEMNN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcatattatcgcgtcgttgatcttcgcgatactattcgttgtttacgtcgctgattgt
cacgtgaaattggataaagggttgacgacaaatcttcgagaaacatgggactacaatgat
tttgtgattgttgctttgaacgccaaatcaaaaaagaaacaatcagaagcagcgattgat
attcttctagctgtaaaatacgagaaatcgaagacaaaaatgatatttaagttcgacagg
cagactaatcgaatcatctacgagaagaccaaccgaaatggtcatcgaactacagagcgc
ctggaaattcagaacgtgaatgctccatggaagaaaataatcgtcttcgtgcatcagaat
aaacctgaccccgaaatagacatttacgttgattgcatttatcaaggcatgctacacttg
aaggaaagcttccgtaaggtagcagaaaatgaagatgattctcttgtagaagtgtttaga
gaaaggaggagtcacgtaaaggtgtatcccttattatccgtcagcgacgctctgaaacaa
gaaaattgtcccaactatctggccggtctaggcacgttatcggatgagtacaaagagtct
gttgagtctgacgaatcaattcctacatcaaccaacgacaattctgataataattccgac
gaattttcacacgagattaatccacctcgtagaaaattaggaaacaatgaaaactccaca
actgaaacttcagatacgcccgaggatgcaagttcacttgaagatttcggcgattcagat
tttaaacaatcatctcaatcgaaacacgatcatcgtcctgttgaacgtcctgagaaatat
cattctgtaagtgaggttgaaactaatcaagaagatgtttcgagtcatgtgaaacgttcg
cgtcagaaaacacgatctgaatactttgacggacccttttacgagaatcccatggaatgg
aataattttggtgaattggatccattgagtcagtccaacttgtatcataagagatttccg
cgaagaggggacatagggattcagagtctgaacgaaaaggtttgtttaatggattttcaa
atcgtgaggacattaaacgagttgattgaagctactaggaaggtctggagagaaatagaa
ttaaacaaactggaaatgcgacatcttcgacaactaattgaaaattgcgcagcatgtcgt
gtacctcctgtttcaccgatgaccacggcggctcctcctcctagttgcgattacaaatcg
ccctgcttcccgggcgctgactgcattaacacaccacgcgggccacagtgcggagcgtgc
ccgccacaatacaccggtgatggatatcgttgcgtgaaaattagttgcgcgcacaaccct
tgcttttacggggtccgttgctacgaccgcgcggatggatacaggtgtggaaattgtccc
aacggttacgtaggtgatggtaaacgctgcgaacgatttaagggtggttgtgagcctcat
tcttgctatccggatgtgaaatgtgatccaattcttcatccgccgtatttcaaatgcggt
tcttgtccaagcgggttcatgggtaatggatctacgtgtgttgatataaatgaatgcgag
ctagctcaaccttgtcatccaggagtacgatgtatcaatcttcatccaggattcaaatgc
gaatcttgtccaccaggatttgctggacctatagtcgaaggagtcggtttggaaatcgca
atggttcgcaagcaaatttgccaagacataaatgaatgcgaaaataacaatggaggatgc
gatccatatatgacatgcattaatacggagggctcgtatagatgtggtacttgtagaaca
ggttacgtgggaaaccaaacatttggcgatgtaaacgccgattgtatttgtaccaatacc
aatgaatacacatgcagatgtcgcgttggatgggcaggggatggactgatgtgtggttcg
gacagagacagcgatggaattcctgataggaacctccgttgtcatgattcacgttgtcgt
atggacaactgtccatttataccaaatactggacaagaggatgcggatagagatggtttg
ggtgatgcctgtgatccagacgctgataacgatggcatcttgaatccttcggacaactgt
cctttagttccaaaccctagccaggaagacagtgatcatgattctatcggcgatgcctgc
gataattgtcctctagtaaaaaatctaaagcaggacgacactgacgatgatggcatcggt
gacgcctgtgacgacgatattgataacgatgctatcttgaatgagaacgacaattgtcca
aaaacgaagaatccagatcaaaatgaccgcgatatggatggaattggcgacgcctgtgac
aattgtcctaatatatacaatgaggaccaattggaccaggatgaagatggggtaggtgat
gcttgcgacaacgacaacgataaagatagagatggtgtgcaagacgatagagacaattgt
cctgatgtcatgaattcaggacaaaatgatattgaccacgatggtataggagatgaatgc
gatgatgatatggataatgatggtgtgcccaattcgattgacaattgtccttacgtttac
aatccggatcaacgtcgcacgcatcatgagaatagtggtgatgcttgctggaacgacaat
gataacgacactgtgaagaacttattagacaattgtcctaacaatagtttgatttgggca
acagatttcagaaaatatactacggttgctttagatcctattggtactgctcaagtagat
cctgtttgggtaatacaccacgaaggggctgaaattcagcagctttataatagtgatccc
gggcttgctattggtccggatatattcagcggcgtagatttcgagggcacgttcttcatc
gacgacgacggagacgacgactacgttggtttcgttttttcttaccaggacaaccgtaga
ttctacgtcgtgtgctggaagaaaggccatcaaccatattggatgccgaatccgttcaga
gcagtaggagaacccggagtttttttgaaactcgtcaattcagatacaggtcccggagaa
tttcttagaaacagcctttggcataatgaagatgtacccaaccaggtgaagattctttgg
catgacccaaagaaaatcgggtggaaagaaaggacaccgtatagatggcatttgttacat
agacctaaaatcggtctaattaggttccgactttatcaaggaaaacagctagtagctgac
tcaggaaatgtttacgactcgacattgaaaggtggcagattgggtgtttactgtttctcc
caggaaaagattacttggtccaatttgttatatacgtgtaaagagactgtcccgaaattg
gtatggaacgagttgccggcgaacttgaagaaagaagtaaatgtagagatgaacaactaa
DBGET
integrated database retrieval system
