Bombus vancouverensis nearcticus: 117163418
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Entry
117163418 CDS
T07628
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117163418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117163418
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117163418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
117163418
NCBI-ProteinID:
XP_033201559
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MNSYTDPLRLNEERLFVDLVESLPKNIKDTRNILEIRDNMLYVWNPKEFCVMALNVAAAR
GKNYVPYQKLRPTDIPIFEIKNLLINETGTQLALWGNLGLVLMELPKRWGKDAMFQGGKE
EILCIVYNETISIRKARWHPGSTNDSHLLVLTSENTFRLYECEVGNKPKYLKSWKVGRVP
FGSPSRIPDFTSLGDIAVDFDFATPTLRRPELFIGKDINKDNVVDWNQIEWPILVLRGNG
EVLIVRGDILHDVHENPVVSGSLSMYPPADDNYGIDSCSIMCLQTTPPIVVVAMSTGKIY
HAILLKEETINDDDNDRTTWSQCSSTYNFHTPEDALYVYECVEIDLGLFFADNDEKYNCP
IHLHADKHNKSRYFCSHNAGIHMITLPMVSQLDEYINASKENEDTCLPSLSNQPSLQYLI
CRRTKHTEQNEATPILGFGLLQEPCVLVALLHTGDVVTRSVIDLYYFPEIELPELTIDKK
KKVNKETFDMYIKRLLKRETSQPLIKIGSKSVTPRECLQLLYHATDVFRKEYFVKHDTVR
KEIGKKMRALKVIKTQLLKELDTLLETKKKLHQTAEQLAEKYEDIKDEQEKLAQRAKEVL
RLVNYKEPSMTPIERAEAEELRKMEIKIEEMKIKLLELKTKSEQTGPIENNENIGKKRKI
VFRGDQENAIKNNLGQMAKDIKDLITEVKKLEEEVSI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtatacggatccgcttcgtttgaacgaagaacgtttgtttgtagatttggtg
gagagtttgccaaagaatattaaggatacgaggaatatcttagaaattcgtgacaatatg
ctgtacgtgtggaatccgaaggaattttgtgtgatggcattaaacgttgcggcagcgcgt
ggaaaaaactatgttccttatcaaaaacttagacctaccgatattccgatcttcgaaata
aagaatctattaattaacgagactggcacgcaactggcattgtggggcaatctaggctta
gttctcatggagcttcccaaacgttggggcaaggatgccatgtttcaaggtggaaaagaa
gaaatactctgcatagtatacaatgaaacgataagcattcggaaggcaagatggcatcca
ggatctacgaatgactctcatttgctagttctaacatctgaaaatacatttcgtttatac
gaatgcgaagtgggtaataaaccaaagtacctaaaatcctggaaagttggtcgtgtacca
tttggttcgccatcgaggataccagacttcacatctttgggtgacatagcggtggacttt
gatttcgcaacgcctactttacgcaggccagaactgtttattggcaaagacatcaacaag
gataatgtggttgattggaatcaaattgaatggccgattctggttctacgtggaaatgga
gaagtgcttattgttcgtggagatattttgcacgatgttcatgaaaatccagtggtatcg
ggatcactctctatgtatcctccagccgacgataattatggaatagactcgtgttccatc
atgtgtctacaaactacaccgccgatagtggtcgtcgctatgtctactgggaagatttat
catgcaattttgttgaaagaagaaacgatcaacgacgatgataacgatagaacgacttgg
tcacagtgtagttcgacttacaattttcacacaccagaggatgcattatacgtttatgaa
tgcgtggaaatagatctaggtctgtttttcgcagataacgatgaaaaatataattgtccg
atacatcttcacgctgacaagcataacaagtcgaggtatttctgttctcacaatgctgga
atccacatgatcactctgccgatggtttctcagttagatgaatacataaacgcttcgaaa
gaaaacgaagatacatgtttaccatcgttatcgaatcaacccagtttgcagtacttaatc
tgtagaagaaccaagcacacagaacaaaacgaagctacaccaattcttggatttggacta
ctgcaggagccatgcgttttagtagctttgttacataccggtgatgtcgtcacccgttct
gttatcgatctttactactttccagaaatcgagcttccagagcttacaattgacaaaaaa
aaaaaagtaaacaaggagacgttcgacatgtacataaaaaggttgctaaaacgtgaaaca
tcacaaccccttatcaaaattggttcgaaatctgtcactccgcgggaatgtttacagctt
ttatatcacgccacggatgtctttcgtaaagaatattttgtcaaacatgatacagtgagg
aaagaaatcgggaagaaaatgcgtgcgttgaaagtaataaaaacccagttattaaaagaa
ttagatactttgctagaaacaaagaaaaaattgcatcagactgctgaacagttggctgaa
aagtatgaagatattaaggatgagcaagaaaaattagcgcaaagagcaaaagaagtatta
cgactagtgaattacaaggaaccgtctatgactcctattgaaagagcagaagcagaggaa
ttaaggaaaatggaaataaagatagaagaaatgaaaatcaaattgctagaactgaaaaca
aaatcggaacaaactgggcctatagagaataatgaaaacattggaaagaaaagaaaaatt
gtttttagaggtgatcaagaaaacgccatcaaaaacaacttgggacaaatggcaaaagat
ataaaagacttaattacagaagtcaaaaagttggaggaagaagtgagtatttga
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