Bombus vancouverensis nearcticus: 117163424
Help
Entry
117163424 CDS
T07628
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvan03016
]
117163424
Enzymes [BR:
bvan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
117163424
Transfer RNA biogenesis [BR:
bvan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117163424
Prokaryotic type
117163424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H
Motif
Other DBs
NCBI-GeneID:
117163424
NCBI-ProteinID:
XP_033201568
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MSETVIKNTDSGNNLNHNIKQEFAQECTSEKYKKNFRKDNKWSGDYRKNRRSYNSGFRNN
NFGNKPFKRNFNNWSNFQSNGKRKKLKVGNRLKECDVGITEFIGNDGFFGVIKERYTDFH
VNEIALDGQIAKLTNQDIPSDGEDDKNLQDLKKMVSDTLWNQLQKLKESEESTMEIDVTN
MDKDQRRAIHRIATTMKNIISQTIDKENKKIMMILPNKNNSSAGRKFRRDKRVDWKKRGE
YCYFLLHKVNMDTMDALNQLAMNLHLRPNNFSYAGTKDRRAWTTQWVSVRKVLPTDILRA
AKNVRGAYVGNFKFETESLKLGMLNGNSFRIALRNVSGTDEQIEKTMISLRDHGFINYYG
LQRFGTVVTIPTYEIGKALLQGKWNEAINLILKPREEEQDEDLVEARKIYEKTKDASAAY
NRIRRYDKIEATLLKGLSISGIHNPQGALDSIPRNARLMYIHAYQSFVWNYMVSRRIKEF
GRNPIVGDLVYGKNVKHNDNEGEFVYDNGSELATEGNEEPIKKISRLESEMDVDVKIEKS
SEASEELSNTLVEEVTGAAECCLKIDESTQQSGTTNEKDESDDSYNLPMVKILEEEDLSN
YTLADVLMPLVGWKVTYPPYAKPWFDEFLAKDGLTTDLRQKNKKYNLGGAYRRILQIPSN
LSWNITHYSEKHSDLIMCDMDEMRRSSAPKNDPKGQYKALIIEMSLKSSTYATMALREIL
KSDTSPQAQAAHSAACNMEVENSSTLKDLAESENTSI
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagacagtaattaaaaataccgattctggaaacaacttgaatcataatattaaa
caagaatttgcacaagaatgtacgtctgaaaaatataaaaaaaattttagaaaagataat
aaatggagcggtgattacagaaaaaatagaagatcgtataacagtggattccgaaataat
aattttggcaataaaccttttaaacgtaattttaataattggtcgaatttccaatcaaat
ggaaaaagaaagaaattgaaagttggaaacaggctaaaggaatgcgatgttggaattaca
gagtttataggaaatgatggattttttggtgttattaaagaaagatatacagattttcat
gttaacgaaattgctcttgatggacaaatcgctaaattaacaaatcaagacattccatca
gatggagaagatgacaaaaatttacaagacttaaaaaagatggtatcggatactctttgg
aatcaactacagaaattaaaagaatcagaagaatctaccatggaaattgatgtaacaaac
atggataaggatcagcgtagagcaattcatagaattgctacgacaatgaagaatattatt
agccaaactatagataaggaaaataaaaagatcatgatgattttaccaaataaaaataat
agcagtgctggtcgtaaattccggagagataaacgggtagattggaaaaagcgaggagaa
tattgttactttttgttacacaaagtgaatatggatacaatggatgctctgaatcaatta
gccatgaatttacatttaaggccaaataattttagttatgctggaacaaaggatcgtaga
gcatggactactcaatgggttagtgtcaggaaagttttacccacagatatattaagagca
gcaaaaaatgtacgtggagcatatgtaggaaactttaaatttgaaacagaatctttgaaa
ctaggcatgttgaatggtaattcctttagaattgctttgagaaacgtcagcggaacagat
gagcaaattgaaaaaaccatgatttctttgagagatcatggatttataaattactatggt
ctgcaaagatttggtactgtagttactattccaacttatgaaataggcaaagctttactt
caaggtaaatggaacgaagcgatcaatttaattttgaagcctagagaagaagaacaggac
gaagacttggtagaagctagaaaaatatatgaaaaaactaaagatgcaagtgctgcatat
aacaggattagaagatatgataaaatagaggctacacttttaaagggtcttagtatatct
ggtattcataatcctcaaggtgctttggattcaatacccaggaatgctcgcttaatgtat
attcacgcctatcaaagttttgtatggaattatatggtatcaagaaggataaaagaattt
ggaagaaatcctatagtaggggatttagtatatggaaaaaatgtaaaacataatgataac
gaaggagaatttgtttatgataatggaagcgaacttgcaactgaaggtaatgaagaacct
attaaaaaaataagtagacttgaaagcgaaatggatgtagacgtaaagatcgagaaatct
tctgaagcatctgaagaattatcaaatactttggtagaagaagtaacaggtgctgcagaa
tgttgtcttaaaatagacgagagtacacagcaaagtggaactactaatgaaaaagatgaa
agcgatgattcatataatcttcctatggtaaaaattcttgaagaagaagatttatcaaat
tatactttggcagatgtattaatgcctctagttggctggaaagttacatacccaccttat
gctaaaccatggtttgatgagtttttagcaaaagatggattaactactgacctgagacag
aagaataaaaaatataatttgggaggtgcctatagaaggatattgcaaattccttcaaat
ttatcttggaacattacgcattattcggagaaacatagcgatcttattatgtgcgatatg
gacgaaatgaggaggtcatcagctccaaaaaatgatccaaaggggcaatataaagcttta
ataatagaaatgtctttaaaatcttctacatatgcaactatggcgttgcgcgaaatttta
aaatctgatacttcgccgcaagcacaagctgctcattctgctgcatgtaacatggaggta
gagaattcaagcactttgaaagatcttgcagagagcgaaaatactagtatctga
DBGET
integrated database retrieval system
