Bombus vancouverensis nearcticus: 117163434 Help Entry 117163434         CDS       T07628                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism bvan  Bombus vancouverensis nearcticus Pathway bvan04382   Cornified envelope formation bvan04512   ECM-receptor interaction bvan04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bvan00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     117163434  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     117163434  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     117163434  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:bvan04147]     117163434    00536 Glycosaminoglycan binding proteins [BR:bvan00536]     117163434 Exosome [BR:bvan04147]  Exosomal proteins   Exosomal proteins of other cancer cells    117163434 Glycosaminoglycan binding proteins [BR:bvan00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117163434 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  117163434 NCBI-ProteinID:  XP_033201579 LinkDB All DBs Position Unknown AA seq 1941 aa AA seqDB search MTRLGLRFVASAVFLAGIVGGQYNHTSWSYNPPPVVPLGRGDIGKPNSTDDDYNISPRWR AFVTNNEDSEEDRRYLNNQGQGYQGQNYDDRYNRYPDSDDYNQRTDDSGGYQTNYGGLDQ ESYNQGQDQIPLDPYNQEAGDPYGRSGGYEDSYGRGEAGGEQRSRDSSGDGYDRNYGSRD DYGRGDPYGQRGYSSGQRGGYGAAGDSDNYPSSYTVVPVPGYKPQRNCTGSACCVPKCFA EKGSRGPPGVMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGLRGPKGDRGKMGIPGFSG ISGVPGVQGPPGAPGLPGRDGCNGTDGEPGDAGRPGDTGPRGYPGPRGPKGDKGQSGFAG RFPVGQKGEPGIDGVRGPPGQPGLQGERGFPGPKGDRGPYGPPGLQGPRGEKGNMGLAFE GPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGERGEKGDTGERGSDGQKGEQGPIGD HGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLSGRPGQKGEPGR DGPMGVPGLRGPPGPPGGGKGTPGPPGPKGPQGFPGPTGPRGADGYPGDPGPRGPIGPSG GPGLAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEKGASIMGP KGMDGAPGRDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKNGIPGFPG SPGEKGEIGGRCIDCLPGLPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSDGLPGPIG PPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLPGPPGEKG PMGFEGFPGPKGVAGDRGFPGQDGIPGRPCVPGRKGEPGVSVKGEHGEPGRRGETGAKGE PGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGISGPPGPP GSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGAAGLKGAKGEVGISVKG SPGLPGPPGQKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAPGEKGDTG PMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSKGYPGRRG LPGLQGRPGIEGAPGLKGERGEKGAPGFPGLRGMEGKPGRPGLTGPKGDIGHPGLPGLPG TIGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGIDGDKGERG LSCNCLDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDIGPMGPPGEPGTPGI DGLPGEPGDIGPPGPPGFPGLDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRGMPGEKGD RGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGLAGYDGEKGDRGTPGPVGNPGPPG LPGPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGVPGRPGEKGERGLPGLPGHKGD QGPYGPVGPQGEKGDMGLMGSPGLPGQDGAPGHRGLSGQEGPKGEKGDNCIPEPGLPGQK GEPGYPGVSGIDGLPGEKGDRGWLGLEGPPGLDGEKGERGFPGPTGKMGAIGFVGQKGDK GLDCLEPPMGPKGDRGYPGPTGPPGSPGEKGASGQPGFPGSHGMKGAPGPQGPPGPVGLP GLQGPVGAPGLPGLQGPVGHPGEPGEPGLPCEAAPDYLTGILLVKHSQTDRVPVCDAGHI QLWEGYSMLSTDGNERSHSQDLGHAGSCVRKFSTMPFLFCDTGNVCNYASRSDRSYWLST TKAIPMMPIEGTAIEEYISRCVVCEVPANVIAVHSQSLNIPDCPHGWTGLWIGYSFVMHT GAGAQGGGQSLSSSGSCLEDFRTTPFIECNEEHCHYYSNEISFWMTTIEDRLQFQRPEKQ TLKAGNLRSRISRCQVCIKNT NT seq 5826 nt NT seq  +upstreamnt  +downstreamnt atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagttggt gggcaatataaccacacatcatggtcgtacaatcctccgcctgttgtaccacttggacga ggtgatattggaaaaccaaatagtacagacgacgattataatatttcaccacgatggagg gcttttgttacgaacaacgaagattctgaggaagataggcggtacttaaataaccaaggc caaggctatcaaggtcagaattacgatgatcggtacaacagataccctgatagcgatgac tataatcagagaactgatgattccggcggatatcagactaattatggaggcttggatcaa gaatcctacaaccaaggtcaagatcaaatcccgttggatccttacaatcaagaagctggc gatccttacggaagatctggaggttatgaagactcttacggaagaggagaagccggagga gaacaaagatccagagattcttctggcgatggctacgatagaaattatggatccagagac gattatggacgcggagacccttacggacaacgcggatactcttcagggcaacgtggagga tatggcgcggccggagattcggacaattatccgagcagttacacggttgtgccagttcca ggatacaagccacaacgaaactgtaccggatcggcctgctgcgtgccaaaatgtttcgcg gagaaaggttccagaggaccgccaggtgtaatggggccacagggacctaaaggtcaaaaa ggatttcctggaacagaaggtcttttgggaccaaagggagaaaaaggtgatcctggtcct caaggactacgcggtccgaaaggtgacagaggtaaaatgggtatacctggattctccggt ataagtggtgttcctggagtacaaggtccacccggagctcctggtctacctggtcgtgat ggctgcaatggaacagacggtgaacctggtgatgctggtcgtcctggagatacaggtcct cgtggttatccaggtcctcgagggcccaagggagacaaaggtcaatcagggttcgccggt aggttccctgtaggtcaaaagggagaaccgggtatagatggtgtcagaggacctccagga caaccaggattacaaggagagcgtggatttcctggacctaagggtgatcgtggtccttat ggtccgcctggtctacaaggaccaagaggagaaaagggaaacatgggtcttgcgttcgaa ggtccgaaaggtgacaaaggtcagaagggagagcaaggacctcctggatcgcctgcagtc ggcggctttctacatccaggagaagaaatagcaggtccacagggagagcgtggtgaaaaa ggagacacgggtgaaagagggtcggacggtcaaaaaggagaacagggaccaattggtgat catggtattcctggtactgcaggtatgaaaggagaaaaaggtcttccaggcgcaccaggt attcgtggacgggatggtttctctggacctccaggtccgcctggacgcaaaggtgatcga ggttatgacggattagacggcctttcaggtcgtcctggacagaaaggagaaccaggtcga gatggacctatgggtgttccaggcttacgaggaccacctggtccacctggaggtgggaaa ggtacgccagggcctccagggccaaaaggacctcaaggttttccaggacccactggaccg cgcggtgccgatggatatcccggagatccaggaccaagaggtcctattggaccatcagga gggcctgggttagcaggtattcctggtccagagggtttaccaggagaaaaaggagcaaag ggagaacctgggatcacaggattccctggaccaacaggtccccgtggatttgatggtccg ccaggtttagcaggttcacgagggctgccaggagagaaaggagcgtcgattatgggcccc aaaggaatggatggagcgcccggtagagatggcgagaaaggacaaaaaggagaacgcggt tacgcaggaccgcgtggagttcctggcgacgtggatggtattccaggagcgcccggagaa cctggtttaccaggagaaccgggaacgccagggaaaaacggcattccaggatttccagga tcacctggtgagaagggagagataggagggcgttgtatagactgtctgccgggattacca ggaatcaaaggtgatcgtggtttcgatggacaacctggacttcctggtccacgaggtccg gctggagaacgaggattccccggagaacctggcagcgacggattacctggaccaattggg ccaccagggcctccgggaaaagatggcattcctggtgcagcaggtccacaaggagaacct ggtactccagcagtggttacggaaaacatgcttaaagtagaaaagggcgataaaggtgtg agaggtccggtaggaagagatggtccacctggtcttcctggtccgcctggagaaaaaggt cctatgggatttgaaggtttcccaggacccaagggtgttgctggagatcgcggattccct ggtcaagatggtattcctggaagaccatgtgttcctggtcgaaaaggagaacctggtgtt agtgtgaaaggagaacatggagaaccaggccgaagaggtgaaacgggtgcaaagggcgaa cctggtccactaggagataaaggagaacctggtctgtgtccaattccggatgaattaatt aaaggaattaaaggcgacagaggtgctcccggtgaaaaaggagagcctggtccacccgga agggatgggttaagcggtgacaaaggtttacaaggtatttcgggcccacctggaccaccg ggatcaattggtgcacctgggccagttggaccaagaggattaccaggtcctcgtggtgac aagggtaatataggaccaatgggtttccctggggaacctggtcgtgaaggacccagaggg ttcccaggcgctgcagggttgaaaggagcaaaaggtgaagttggtatctcggtcaagggc agtcctggattgccaggaccaccgggacaaaagggagagaaaggtcttccaggaccacca ggaaaggaaggtcctgatggtctgccgggtttgccaggattttccggagagaagggtgat gcaggtattccaggcataggtggtttgcctggtgcgccaggagaaaagggagatactggt ccgatgggacctccaggcccgcctggtgttgctggaattcctggtatagacggaaataaa ggtgaaccgggattgccgggcgaggctggcaaaccaggactcccaggattcccaggtatc aaaggtgatcgtggcgaaccgggtatcgatggatcgaaaggttacccaggaagacgtggt ctacctggtttacaaggtagacctggtatagaaggtgcacctggtttgaaaggagaacga ggtgaaaaaggcgcccctggtttccctggattacgtggaatggaaggaaaacctggccgc cctggattaactggaccaaaaggagatataggtcatcctggtctgcctggtcttcctgga actatcgggttccaaggacctaaaggtgatcaaggtttaccaggattgccaggacgcaaa ggagaaccaggtctagtttctgagaaaggacagaaaggtgaaccaggaatgccaggtatc cgtggtcctgttggtcctcctggtagagatggtattgacggagacaaaggggaacgtgga ttgtcgtgtaattgtttagacggattgccaggtcttaagggagaacctggtctgccaggt cgcgatggtttaccaggacctatagggctaaaaggtgacgctggagtaagaggtttccat ggttctcaaggagatataggaccaatgggtccaccaggtgaacccggaacacctggaatc gacggattaccaggcgagccaggtgacatcggtccaccgggtccacctggtttccctggt ttggatggtgatgtgggagctccaggacatcctggcctcaacggtggcaaaggagaccgt ggtttgccaggtcttgttggggaacctggtatccgtggtatgcctggagaaaaaggtgac cggggacaacctggaccgacagttgcgatcaaaggtgagaaaggcgaaccaggtatgcca ggattacgaggtgtagctggagagaaaggagatcgtggcgaggaaggtctagctggttat gatggcgaaaaaggagataggggcacgccaggtccagttggaaacccaggtccacctggc ctccctggacctaaaggtgaagaaggtccacgtggacctacgggaattgctggattaact atcaagggtgagaagggtttaccaggtctgccaggaaagcacggacgagaaggagtacca ggacgaccaggagagaagggagaacgaggattacctggtttaccaggacataaaggagat cagggaccttatggacctgtcgggccacagggcgagaaaggagatatgggacttatgggt tctcccggtttaccaggtcaagatggagctccaggtcatagaggactctcgggtcaagaa ggtccaaaaggtgaaaaaggtgacaattgtataccagaaccaggtctgccgggacaaaag ggagaaccaggatacccaggagtttccggaattgatggactccccggtgaaaaaggtgac agaggttggctcggtctagagggtccacctggtctggatggagagaaaggtgaaagagga ttcccaggtccaacgggaaaaatgggtgctattgggtttgttggtcagaagggtgacaag ggtctcgactgcctcgaaccaccgatgggaccaaaaggagaccgtggttatcctggaccg actggcccgccaggctcgccaggagagaaaggagcttcaggtcagccaggattcccagga tcgcatggaatgaaaggtgcaccaggacctcaaggaccaccaggtccagttggattacca ggactgcaaggacctgttggtgctcctggtttaccaggtcttcaaggacccgtgggtcat ccgggtgaaccaggagaaccaggactaccatgcgaagctgcgcctgactaccttactggt atcttgctagtaaaacacagtcaaactgacagagtgcctgtttgtgatgcaggacatatc caactctgggaaggatacagtatgttatctacggatggcaatgaaagatcgcactcacaa gatttaggtcatgccggctcgtgcgtgcgaaagttctcgacgatgccgttcctcttctgc gacaccggcaacgtttgtaactatgcgagtcgtagcgatcgttcttactggttgtcgacc actaaagcaattcccatgatgcctattgaggggacagcgatagaggaatacatctccaga tgcgtggtttgcgaggttccagcgaatgtgatagccgtacacagccagtcattgaatatt ccagattgtccacacggatggaccgggctttggatcggatacagttttgtcatgcatacg ggtgccggtgcccagggtggaggacaatccttgtccagttccggatcctgtctggaagat ttccgtacaacgccatttatcgaatgtaacgaagaacactgccattattactcgaacgag atcagcttttggatgacgacgatagaggacaggcttcagttccaaaggcctgagaaacag accttgaaggcaggcaacctcaggtcccgaataagtcgctgccaagtgtgtataaagaac acgtaa

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