Bombus vancouverensis nearcticus: 117163611
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Entry
117163611 CDS
T07628
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
bvan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117163611
03015 mRNA surveillance pathway
117163611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117163611
Enzymes [BR:
bvan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117163611
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117163611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
117163611
NCBI-ProteinID:
XP_033201926
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MASAELEWAKFVDEQEKLSAKVSNLNIDKEPKENTANTDSKNDDGSDEQISAAEKSLFQK
IIRKGLVETTQDIEVQRKDPSSPLYSVKSFEALHLKPALLKGVYAMGFNAPSKIQETALP
TLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDTTKNYPQVLCLSPTYELAIQTGEVAAK
MSAFCNEIKIKYAVRGEEISRGSKITEHIIIGTPGKVLDWAVKFKFFSLSKISVFVLDEA
DVMIATQGHQDQCIRIHKQLPRTCQMMFFSATYEPEVMKFAEIIVNNPLIIRLLKKEESL
DNIKQYYVKCKDLDEKYAAITNIYGVITIGQAIIFCHTRKTAGWLAEKMTKDGHAVAVLS
GELTVEQRISVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPVDQNRQADCETYL
HRIGRAGRFGKSGIAINLIDSSHAMQICKDIEEHFGRKIHYLDAEDADEIEKIGA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctgaacttgaatgggctaaattcgtagacgaacaagagaaactatcagca
aaggtgtccaatctaaatatagataaagaacctaaagaaaatacagcaaatacagattcc
aaaaatgatgatggttcggatgagcaaatctcagccgcagaaaaatcattattccaaaaa
attatacgtaaaggtttggtagaaacaacacaagatatagaggttcaaagaaaggatcca
tcttcacctttatatagtgttaaatctttcgaagctcttcatcttaaacctgctttatta
aaaggagtatatgcaatgggatttaatgctccatcaaaaattcaagaaactgcattacct
actttacttgctgatccaccacaaaatatgattgctcagtcacaatctgggacaggtaaa
acagctgcatttgtattggcaatgctaagcagagtcgacaccaccaaaaattatcctcaa
gtgctttgcttatcaccaacttatgaattagctatacaaacaggagaagtagcagctaaa
atgtctgcattctgtaatgaaataaaaataaaatatgctgtaagaggagaagaaataagt
cgtggatcaaagattacagaacacataatcattggaacaccaggaaaagttttagattgg
gctgttaaatttaagttctttagtctaagtaaaatatcagtttttgttttagatgaagca
gatgtaatgatagcaacgcaaggtcatcaagaccagtgtattcgtattcataagcagctt
ccacgcacatgtcaaatgatgtttttctctgcaacttatgagccagaagtgatgaaattt
gcagaaattatagttaataatcctttaataataaggttactgaaaaaagaggaaagttta
gataatattaaacaatattatgtaaaatgcaaggatctggatgaaaaatatgcagctatt
accaacatatatggtgtaataacaataggacaggcaattattttttgtcatactagaaaa
acagcgggttggttagccgaaaaaatgacaaaagatggtcatgcagtagctgttttatct
ggggaactgacagttgaacagagaatttcagttttggatcgttttagagctggtcttgaa
aaagttcttatcacaactaatgttttagccagaggtattgacgttgaacaagtaacaata
gttgtcaattttgatttaccagtggatcaaaatcggcaagcagattgtgaaacatatttg
catagaattggtcgtgctggacgttttggtaaatctggaattgctattaatctaatagat
tcatctcatgcaatgcaaatatgtaaggatatagaagaacattttggaagaaaaatacat
taccttgatgcagaagatgcagatgaaatagaaaaaataggagcctag
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