Bombus vancouverensis nearcticus: 117163688
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Entry
117163688 CDS
T07628
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03018
RNA degradation
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117163688
09123 Folding, sorting and degradation
03018 RNA degradation
117163688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117163688
03041 Spliceosome [BR:
bvan03041
]
117163688
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117163688
mRNA degradation factors
5'-3' decay
Lsm complex
117163688
Spliceosome [BR:
bvan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117163688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117163688
NCBI-ProteinID:
XP_033202095
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGEMKGRGQSQRGRGSGRGTFGRGGRGPAAL
GRGGGNQGGNKSQNKARTK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttacctttgtcgttattaagaactgctcaaaaccatcctatgctagtcgaacttaag
aatggagaaacgtataatggacatttagttagttgtgatagctggatgaatattaatctc
agagaggttatatgtacatccagggatggtgataaattttggagaatgcctgaatgctat
attcgaggtagtacaattaagtatttacgaattcctgatgaagtcatagatatggtaaaa
gaagatgtacaaatgaaatcgaggggacgtggagaaatgaaaggaagaggacaaagtcaa
cgaggtcgtggtagtggaagaggaacttttggtcgtggtggtagaggccctgctgctctt
ggtcgtggtggaggtaatcaaggagggaacaaatctcaaaataaagcaagaaccaaatga
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