Bombus vancouverensis nearcticus: 117163963
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Entry
117163963 CDS
T07628
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvan03016
]
117163963
Enzymes [BR:
bvan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
117163963
Transfer RNA biogenesis [BR:
bvan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117163963
Prokaryotic type
117163963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
117163963
NCBI-ProteinID:
XP_033202619
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MFRGNQYIIRNNLIFSRFIRLQYDNFFDKNMSSSIKQDENIIERSNKRQMIDESYEMITK
APKVEPTEDVVQRKNNVKRKNFVIMLGYVGRNYSGMQINRGTKTIEESLLSALLKANFIT
KEQFEDVREIKFQRAARTDKGVSAVRQVVSLQLPDYVNKEDINQYLPKDIRVFDVKRVTK
TFNSKNKCDARTYRYVLPTFVLAPEDSNFLQIDEEEGVNEEQRLKQLSMIDGKPYHEFRL
TPEMLDKLNEILKLLEGTHNFHNFTSKTKPLDPRAKRYIIYFRCVETFITNNMEFAVLEI
KGQSFMLHQIRKMVALVIGICRNIVTSDIIKDVFSVEKIDIPIAPGLGLSLHFVHYKYYN
ERFGKDGFHKTLEWQECNDDVDKFYKECILQDIIDEEISEKVMMHWLASILTPKRFAFKE
YVQCEYVS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtggcaatcagtatattattagaaataatttaattttttcccgttttataaga
ttacaatacgataatttttttgataaaaacatgtcaagcagtattaaacaagatgagaat
attattgaacgaagtaataaaagacaaatgatcgatgaaagttatgaaatgataacaaaa
gctccaaaggtagaaccaactgaagatgtagtacaaagaaaaaacaacgttaaaaggaaa
aactttgtgataatgttaggttacgtgggcagaaattattctggtatgcaaattaatcgt
ggtacgaaaactattgaagaaagtttattatctgctttgttgaaagcaaattttattacg
aaagaacaatttgaagatgtaagagaaattaaatttcaaagagctgcacgtacagataaa
ggtgtatcagcagttaggcaagttgtttctctacaattgcctgattatgtaaacaaagaa
gatataaatcagtatcttccaaaggatatcagagtatttgatgtaaagagggtaacaaaa
acttttaatagtaaaaataaatgcgatgctagaacatacagatatgttcttcccacattt
gttttggctccagaagattcaaattttttacaaattgacgaagaggaaggagtaaatgaa
gaacaacgacttaaacaactatctatgatagatggaaagccatatcatgaattccgattg
actccagaaatgcttgacaagctaaatgaaattttgaaattattagaaggcacacataat
tttcataattttacatcgaaaacaaagccattagatccaagagccaagcgttatataata
tactttcgttgtgttgaaacatttattacaaataatatggaatttgcagtactggaaata
aaaggacaaagttttatgttacatcaaattagaaaaatggtagctttagttatagggatt
tgtagaaatattgtgacaagtgatattatcaaagatgtattttcagtagaaaaaattgac
atccctattgcacctggtttaggactaagtttacattttgtacattataaatattataat
gaaagatttggaaaagatggatttcacaaaacattagaatggcaagaatgcaatgacgat
gttgacaaattttataaagaatgcattttacaggatataatagatgaggaaatatcagaa
aaagtaatgatgcattggttggcatctatcctaacaccaaagagatttgcatttaaagaa
tatgtacagtgtgaatatgtatcatga
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