Bombus vancouverensis nearcticus: 117164161
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Entry
117164161 CDS
T07628
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03030
DNA replication
bvan03410
Base excision repair
bvan03420
Nucleotide excision repair
bvan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117164161
03410 Base excision repair
117164161
03420 Nucleotide excision repair
117164161
03430 Mismatch repair
117164161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvan03032
]
117164161
03036 Chromosome and associated proteins [BR:
bvan03036
]
117164161
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117164161
DNA replication proteins [BR:
bvan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117164161
DNA Replication Termination Factors
ELG1-RFC complex
117164161
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117164161
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117164161
Check point factors
HRAD17(Rad24)-RFC complex
117164161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
Rad17
AAA_16
Mg_chelatase
AAA_24
Viral_helicase1
AAA_11
AAA_19
RuvB_N
nSTAND3
AAA_assoc_2
AAA_18
DEAD
AAA_28
AAA_5
NTPase_1
ABC_tran
MeaB
DNAX_ATPase_lid
AAA_23
RNA_helicase
MipZ
AAA_25
SRP54
AAA_2
AAA_3
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
117164161
NCBI-ProteinID:
XP_033202935
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MGVENIVGEPMNIEAVPSTSGYNIKNKEKDKKSANLPWIEKYRPQIFSDIVGNEDTVSRL
SVFAEHGNCPNIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERGIDVVRNKI
KMFAQKRVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNTSEKIIEP
IQSRCAMLRYGKLSDAQILAKIIEVCQKEDVSHTDDGLEAIVFTAQGDMRQALNNLQSTY
NGFGHVNSDNVFKVCDEPHPLLLKEMLELCAQGKISKAYGIMEHLWKMGYSAEDLISNIF
RVCTNLSIEEPLKLDFIKEIGITHLGIVDGINSLLQMNSLLARLCQRTMQK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgagaatattgtcggtgaacctatgaatattgaagctgtgccatcgacgagt
ggttataatataaaaaataaagagaaagataagaaatcggccaatttgccatggattgaa
aagtatcgaccacaaatattttctgacattgttggtaatgaagacacagtatccagatta
tcggtatttgctgaacatgggaactgtcctaatattattattgctggtccaccgggagtt
ggtaaaactacaactatattatgtttggcacgtattttattaggaccagcgtttaaggaa
gcagtattagaattaaatgcgtcaaatgagagaggaatagatgttgtcagaaataaaatt
aaaatgtttgcccaaaagagagtaaatttggcaaaaggaaaacacaaaataataattctg
gatgaagctgatagcatgactgatggtgcgcaacaagcattacgtaggacaatggaaata
tatagcaatacaactaggtttgcactagcttgtaatacaagtgaaaaaattatcgagcca
atacagtcacgctgtgccatgttaagatatggaaaattatcagatgcgcaaattttagca
aagattattgaagtttgtcagaaagaagatgtttcacatacagatgatggtttagaagca
atagtatttactgcacagggtgatatgagacaggctctaaataatttacaatcaacttat
aatggttttggacatgtaaacagtgacaatgtttttaaagtctgtgacgaaccacatcca
ttacttcttaaagaaatgttggaattatgtgcacagggtaaaatttccaaagcatatggg
ataatggaacatttatggaaaatgggatattctgcagaagatttgatcagtaatatattc
agagtttgtacaaatctatccatcgaagaaccattaaaattagattttataaaagagatt
ggaataactcatctaggaatagtggatggaattaatagtttactacaaatgaacagtctt
cttgctagactttgtcaaagaactatgcagaaataa
DBGET
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