KEGG   Bombus vancouverensis nearcticus: 117164161
Entry
117164161         CDS       T07628                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03030  DNA replication
bvan03410  Base excision repair
bvan03420  Nucleotide excision repair
bvan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117164161
   03410 Base excision repair
    117164161
   03420 Nucleotide excision repair
    117164161
   03430 Mismatch repair
    117164161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bvan03032]
    117164161
   03036 Chromosome and associated proteins [BR:bvan03036]
    117164161
   03400 DNA repair and recombination proteins [BR:bvan03400]
    117164161
DNA replication proteins [BR:bvan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117164161
  DNA Replication Termination Factors
   ELG1-RFC complex
    117164161
Chromosome and associated proteins [BR:bvan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117164161
DNA repair and recombination proteins [BR:bvan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117164161
  Check point factors
   HRAD17(Rad24)-RFC complex
    117164161
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 Rad17 AAA_16 Mg_chelatase AAA_24 Viral_helicase1 AAA_11 AAA_19 RuvB_N nSTAND3 AAA_assoc_2 AAA_18 DEAD AAA_28 AAA_5 NTPase_1 ABC_tran MeaB DNAX_ATPase_lid AAA_23 RNA_helicase MipZ AAA_25 SRP54 AAA_2 AAA_3 AAA_30 AAA_29
Other DBs
NCBI-GeneID: 117164161
NCBI-ProteinID: XP_033202935
LinkDB
Position
Unknown
AA seq 351 aa
MGVENIVGEPMNIEAVPSTSGYNIKNKEKDKKSANLPWIEKYRPQIFSDIVGNEDTVSRL
SVFAEHGNCPNIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERGIDVVRNKI
KMFAQKRVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNTSEKIIEP
IQSRCAMLRYGKLSDAQILAKIIEVCQKEDVSHTDDGLEAIVFTAQGDMRQALNNLQSTY
NGFGHVNSDNVFKVCDEPHPLLLKEMLELCAQGKISKAYGIMEHLWKMGYSAEDLISNIF
RVCTNLSIEEPLKLDFIKEIGITHLGIVDGINSLLQMNSLLARLCQRTMQK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggagttgagaatattgtcggtgaacctatgaatattgaagctgtgccatcgacgagt
ggttataatataaaaaataaagagaaagataagaaatcggccaatttgccatggattgaa
aagtatcgaccacaaatattttctgacattgttggtaatgaagacacagtatccagatta
tcggtatttgctgaacatgggaactgtcctaatattattattgctggtccaccgggagtt
ggtaaaactacaactatattatgtttggcacgtattttattaggaccagcgtttaaggaa
gcagtattagaattaaatgcgtcaaatgagagaggaatagatgttgtcagaaataaaatt
aaaatgtttgcccaaaagagagtaaatttggcaaaaggaaaacacaaaataataattctg
gatgaagctgatagcatgactgatggtgcgcaacaagcattacgtaggacaatggaaata
tatagcaatacaactaggtttgcactagcttgtaatacaagtgaaaaaattatcgagcca
atacagtcacgctgtgccatgttaagatatggaaaattatcagatgcgcaaattttagca
aagattattgaagtttgtcagaaagaagatgtttcacatacagatgatggtttagaagca
atagtatttactgcacagggtgatatgagacaggctctaaataatttacaatcaacttat
aatggttttggacatgtaaacagtgacaatgtttttaaagtctgtgacgaaccacatcca
ttacttcttaaagaaatgttggaattatgtgcacagggtaaaatttccaaagcatatggg
ataatggaacatttatggaaaatgggatattctgcagaagatttgatcagtaatatattc
agagtttgtacaaatctatccatcgaagaaccattaaaattagattttataaaagagatt
ggaataactcatctaggaatagtggatggaattaatagtttactacaaatgaacagtctt
cttgctagactttgtcaaagaactatgcagaaataa

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