Bombus vancouverensis nearcticus: 117164230
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Entry
117164230 CDS
T07628
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117164230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bvan04990
]
117164230
Domain-containing proteins not elsewhere classified [BR:
bvan04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
117164230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
PLAC
TSP1_spondin
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
117164230
NCBI-ProteinID:
XP_033203047
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MDKAFLFSLLISLTCFWSFCGGHLIDGIFTEPTLERGYNLVATVPRGAVVLNVTQLRHTE
NYLAVKLQDGSYLFNGNYSISLSGKYQAAGTTFVYFRQGSQNLESFSAIGPLEEPIDVMV
LYQEPNPGIVYRYIIPGSAPSPNIHLGHKPVILFSVSNKAGEPILSAIPHRKIDVGSTND
GTQAYLPRRYKKRKFFWKASGYTECSRTCGGGVQMLRYVCTREHTQAPVPDKRCHTLEKP
RETQVKCNTIPCPPKWRAGPWGVCSVTCGSGNRLRDVECVQEITPSLVMRIADGACTEPN
ILPTTEICEMPQCEFDAKATTTTLPPPQWSVGTWSSCSTTCGPGKRTRTATCVTHGPSCD
LEVKPITQDACDLGPCSIKSPQTNAISTRLQSPQWLYSEWSDGCSAECGVGLQTRKIFCE
KSPGEGFCDQSTRPESSRTCSSNRTCSGQWFTGPWTACSTECDSGEQVREVVCITILRGS
LRIVLDMNCPANKPETRRSCSGPPCTSSWFISDWTECSRLCGKGIQKREVRCLNREGQPP
EHHELHCKEKDRPISRRTCNDYPCKDDVHRSENQHTVLQVQNDPEISNVLEENPLCKDST
TNCNLVAQARLCTYQFYHQLCCQSCSKKQEFE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggataaagctttcctgttctctctattgatatctctgacgtgtttctggagtttctgc
ggcggacacttaatcgacgggattttcacggagccgaccttggaacggggttacaacttg
gtggccacggttccccgaggtgctgtagttctgaacgtgacacagttacgtcatacggag
aattatttggcggtcaagttgcaggatggtagctatttgttcaatggaaattacagcatc
agtttgtctggtaaatatcaggcagctggaactactttcgtttattttcgtcaaggttct
cagaatttggaaagtttctctgccattggaccattagaggaacctattgatgttatggtt
ttgtaccaagaaccgaatcctgggattgtatatcgatacattatccccggaagtgcacca
tctccaaacattcatcttggacacaaaccagtaattctattttcagtttctaacaaagct
ggtgaacccattttatcggcgatacctcataggaaaatagatgttggttctactaatgat
ggaacgcaagcatatcttccaagacgatacaaaaaaaggaaattcttttggaaagcaagc
ggttataccgagtgtagtagaacttgtggtggaggtgtccaaatgctgaggtatgtatgt
acaagggaacacacgcaggctccagtgcctgacaagagatgtcatacgttggaaaagcca
cgagaaactcaagtaaaatgcaatactataccttgtcctcccaaatggagagccggtccg
tggggtgtttgttcggttacgtgcggtagcggtaatcgtctgagagacgtagaatgcgtg
caagaaataacgccatcactagtaatgagaatagctgatggcgcctgcacggagccgaat
attcttcctactaccgagatttgcgaaatgccacagtgtgaattcgacgcgaaagcaacg
acgacaactttaccgccaccacaatggagcgtgggcacatggtcatcatgctccacaact
tgtggtccaggtaaaagaacaagaactgcgacctgcgtcactcacggaccttcatgtgat
ctcgaagtgaagcctattactcaagatgcttgtgatttgggaccttgttccattaaatca
ccgcaaacaaacgccatttcaactagacttcaaagcccacaatggctgtacagtgaatgg
tctgatgggtgctcagccgaatgtggagtcggcttgcagacgaggaagatcttctgcgaa
aaaagtccaggagaaggattttgcgaccaatcgacaagaccagaatcatcaagaacctgt
tccagcaacagaacctgtagtggacaatggtttacgggaccctggaccgcgtgttctaca
gaatgtgattcaggcgaacaagttagagaagtggtgtgcataacgatacttcgtgggtcg
ctccgcattgttctggacatgaactgtcccgcaaacaaaccggaaacgagaagatcctgc
agcggtccaccttgtacatcctcgtggtttatatcagattggacagaatgttctcgattg
tgcggaaaaggcattcaaaagagagaagtaaggtgtttgaacagagaaggtcaaccacct
gagcatcacgagcttcattgtaaagaaaaggatcgtcctatatctcgacgaacctgcaac
gattatccttgtaaggacgacgttcacagatctgaaaatcaacatacagtcctgcaagtt
caaaacgatccagaaatctcaaatgttctcgaggaaaacccactttgcaaggacagtaca
acaaattgcaacttagtggcgcaagcacgactctgcacttaccagttttatcaccaattg
tgctgtcaatcgtgttccaagaagcaagaattcgaatga
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