Bombus vancouverensis nearcticus: 117164431
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Entry
117164431 CDS
T07628
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvan03009
]
117164431
Ribosome biogenesis [BR:
bvan03009
]
Eukaryotic type
90S particles
Other 90S particles
117164431
Pre-60S particles
Other pre-60S particles
117164431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
UTP20
Ig_GEX2_N
INTS1_R4
YdjC
Motif
Other DBs
NCBI-GeneID:
117164431
NCBI-ProteinID:
XP_033203361
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MGKLGLRLNSRKKAKRWPKGQSSSSNPQTKKHREQASWMFFKDSTASAKPGITEESLKKH
NAIQGIESQVETPDSKGNSWETCTENTADTFATNCSNISFSRFLHHFQSKSLLHKEMLAV
LSAVTEIIKQHGGNESSTEYFAALMSTLEAIESDMSIAATLSLLGMALKTVPKNVLNIQF
GSASGIFLRILVKYASSEEHLILRHCIHCLSLLLRAQEAATWSSSSTMQVLDVILSFSIH
YKHKLRQSAQHGICTILNGGDIMKGENPPQYHPATPYVAKFCIGQLDSESDGITNVLRVL
TLLKDIFHHLPKIHVKTISESLLKLMTMKNVLVTSCCLQTFHGLFVSRPSEAILPVQRNG
QIITALYDYQPPATDTQPTLAWLTVMQEAYLNLAHNSLNLCAVLLPRILNTCSQLWLSGK
SEVISGSSHTIKILLQDCVGKMCETEESMKTYKDTINQITFMIHQALGYQYLEAWCYILD
LTALLFQVTGKARSPQLVEILRSLAELRDSYNFSLINNAEYAIGAAIRVLGLETVLNLIP
LKVSDNAINLKRTWLLPLLKDCVLGGSLTFFMETLLPIAALCEKKATEPVGGKTYEFLVC
QVWAILPSICNNAIDVKDNFKNIAKLLGTNLNERKNLRMSIMSALRRLITKALEDDKKED
IHELARFAKNYLPLFLNLYTTKPLGTDEEGQRFATYDTIRVYLTIADKELVHELFDRALF
KLKEPDIDDFFKESIHDIIRLFINYTDINRLKTFYDMCVPLLKEISKTKEQKKAYRFFEE
ICGSEKETCKEFVVQYRREIQKLLISSATEVAKPSRGARLRCLIHLIKIHPQLEKTKFLE
AIVPEAIMCLKELNEKCRTSAYQLLNIIAEKFVGNPTHFNDFVNMLMVGLSGAIEKYCTA
SLLALSSVTYHYNGSLGIETVKEILGQACIFVTSPTREIAEAALAYIKVYITVMPSHIAA
SNLKLLIDALCAMNDDCHRHFRQKVRDILVKLIRKYGMETISGMIPASNAMLHKRLKNMN
KAEEAKKKKKELRKLKKQENDEDTEFNAKRKPKSIEEILADSDDEFDEDMDNEESRKRKK
KTSQKEAWIHENEEIVDLVDPAAARNISTTQPTVAINSKIAAIKRKHREFKTTSDGRLII
TVDNEKDNEPESKRKKKSALLLHSDSEDDYEDDVQSVAMSQAMDKKRKYSDSYDNISVRS
GSTLKYQTGGSGIHRPLKRSRTEYVPGAEYKASKAGGDVKRKGKPDPYAYVPLSRAALNK
RKKKKNASKFQNIIRGAKKGAKIGMKQRKS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaattgggattgcggttaaatagccggaaaaaggcgaaacgttggccgaagggt
cagagctccagctctaatccacaaactaaaaagcatcgggaacaggcatcctggatgttc
ttcaaagattcaacagcctctgcgaagcctggtataacagaggaaagtttaaaaaaacac
aatgctattcaagggattgaatcacaggtagaaacacctgatagcaaaggtaactcttgg
gaaacatgtacagaaaacactgctgatacctttgctaccaattgttcaaatatatcattt
agtaggttcttacatcattttcaatcgaaatcactgttgcataaggaaatgttagctgtg
ttgtccgctgtaacggagattataaaacagcatggtggtaatgaatctagcacagaatat
tttgctgcattgatgagcactttggaagcgattgaatcggatatgtcaatcgcagccacg
ctctcgttattaggcatggccctaaaaactgtcccaaaaaatgttttaaatatccaattt
ggatctgcaagtggaattttcttacgtatccttgttaaatatgcatcgtcggaagagcac
ttaatacttcgacattgtattcattgtttatctttgctccttcgagcacaagaagcagcc
acatggtctagttcatctacgatgcaagtgttggatgtcattttatcatttagtatacac
tataaacacaaattacgacaatcggcacaacatggaatatgtaccatattaaacggaggt
gatatcatgaaaggtgaaaacccaccgcaatatcatccagctactccatacgttgcaaaa
ttctgtattggtcaacttgactccgagtccgatggtattacaaatgttcttcgtgtcctt
acactactaaaagacattttccatcatttaccaaagattcatgtgaagactatcagtgaa
tctttattgaagcttatgactatgaaaaatgtgttagtaacttcatgttgtctacaaacc
tttcatggtttgttcgtttctcgaccatcagaagctattctaccagtacaaagaaatggg
caaatcattactgccttatatgattatcaacctccagcaactgatacacaaccaacctta
gcatggctaactgtaatgcaagaagcgtatttaaatttagcgcacaattcattaaattta
tgcgcagttcttttaccaagaattttgaacacatgtagtcaattgtggctttcgggcaaa
tcggaagttatatctggttcttcgcacacgataaaaattttattacaagattgtgtcggt
aaaatgtgtgaaaccgaagaatcaatgaaaacatataaggacactatcaatcagataact
tttatgatccatcaagcattaggttatcaatatttggaagcttggtgttatattcttgat
ttaacagccctactgtttcaggtaactggtaaagcgagaagtccgcaattagtagaaata
ttgagaagtctagcggagttacgtgattcctataatttttctttgataaataacgcagag
tacgctattggcgctgcgataagagtactcggactggagacagttttaaatttgattcca
ttgaaagtatcggacaatgcgattaatttaaaaagaacttggttactaccattattgaaa
gattgtgtgctaggtgggtcacttactttcttcatggaaacattgctacctatcgctgca
ttgtgcgaaaaaaaagcaaccgaacctgtaggcgggaaaacttacgaatttctcgtttgc
caagtctgggctattttaccaagtatatgcaacaacgctattgatgtgaaagataatttc
aagaatatagctaaactgttagggacaaatttaaatgagagaaaaaatttaaggatgtcg
ataatgtctgccttacgaagattaataacgaaagcacttgaagacgacaaaaaagaagat
atacacgaactagctagatttgcaaagaattatttaccattgtttctaaatctatacact
actaagccacttggaactgacgaagaaggacaacgctttgctacatatgatacaataaga
gtgtatcttacaattgcggataaggaattggtacacgaattattcgatcgtgcgttattt
aagttgaaagaacctgatatcgacgactttttcaaagaaagtattcacgatataataaga
ttatttattaattatactgacattaatagattaaagacgttttacgatatgtgtgtacca
cttcttaaagaaatttctaaaaccaaggaacagaagaaagcatataggttttttgaagag
atatgtggcagtgagaaggaaacgtgtaaggagtttgtagttcaatacagacgcgagata
caaaaattattaatatcctcggctactgaagtcgcaaaaccaagcagaggagcacgatta
agatgcttaattcatctcataaaaattcatccacaacttgagaaaactaagttcttagaa
gccattgtgcccgaagcaataatgtgtttaaaagagttaaatgagaaatgtcgaacttct
gcataccaacttttaaatattattgcggagaaatttgtgggaaatcctacacattttaat
gactttgttaatatgctcatggttggtttgagtggtgcgatagaaaagtattgtaccgca
tccttgctggcgctttcatccgttacatatcattacaatggatctttaggtatagagaca
gttaaagaaatcttgggacaagcttgtatttttgttacaagtccgacaagagaaattgca
gaagctgcattggcatatatcaaagtatatattaccgtgatgccatctcatattgctgct
tcgaatttaaaattgttgatagacgctttatgtgcaatgaacgatgactgccataggcat
ttcagacaaaaagtacgagatattctcgtaaagttaataagaaaatacggaatggaaaca
atttctggcatgattccagcttctaatgcgatgttacataagagattaaaaaatatgaat
aaggcagaagaagcgaagaaaaagaaaaaagaattgaggaaattgaaaaaacaagaaaat
gacgaggataccgaattcaatgcaaagagaaaacctaaaagtatagaagaaatactggcg
gatagcgatgatgagttcgatgaagatatggacaatgaagagtcaaggaaaaggaagaaa
aaaacatcgcaaaaggaagcctggattcatgagaatgaagagattgttgatctcgttgat
cctgcggctgctcgaaatatatcaacaacacaacctacagtcgctataaattcaaaaata
gcggctataaaacggaaacatcgtgaatttaagactacgtctgatggccgtcttattatc
acagtagataatgagaaagataacgaaccagaatccaagagaaagaagaaatctgcactt
ttgttgcacagtgattcagaagacgattatgaagatgatgttcagtctgtagccatgtcg
caagcaatggataaaaaacgtaaatatagcgatagttatgataatattagcgtaaggagt
ggatccacattgaagtatcaaacaggaggatctggaatacatcgaccattgaaaagatca
agaacagaatatgtaccaggagcagaatataaagcatcaaaggctggaggtgatgttaaa
aggaaaggaaaaccagatccatatgcttatgtacctctgtcaagagcagcattaaacaaa
agaaaaaagaagaaaaatgcgagtaaatttcagaacattattagaggagcgaagaaaggt
gcgaaaattggaatgaagcaaaggaaaagctaa
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