Bombus vancouverensis nearcticus: 117164517
Help
Entry
117164517 CDS
T07628
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03020
RNA polymerase
bvan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117164517
09124 Replication and repair
03420 Nucleotide excision repair
117164517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117164517
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117164517
Enzymes [BR:
bvan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117164517
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117164517
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117164517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
117164517
NCBI-ProteinID:
XP_033203544
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MYSLEDDQYDDEDAEEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVE
DSPQIDLQAEAQHTSGEIENPVRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKDGEDPIETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWINMM
AKSGASIKKSAIGQRIIAIIPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGISDFCETK
KAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRLYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRISRPLLIVEGQTLLLKKRHIDMLKERDYNNDGWQELVGSG
VVEYIDTLEEETVMIAMSPEDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNAIYDKLDDDGIIAPGIRVSGDDVVIGKTITLPEADDELDSTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFECKG
CKNKTQISQIRLPYAAKLLFQELMAMNIAPRLMVA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtattctctggaagatgatcaatacgatgatgaagatgcagaagaaatttcgtcaaaa
ctttggcaagaagcctgttggattgttattaatgcctattttgatgaaaaaggtcttgtg
agacaacaacttgacagttttgatgaatttattgaaatgtcagttcaaagaattgttgaa
gactcaccacaaattgatttacaagcagaagcacaacatacttcgggcgaaatagaaaat
ccagttagacacttattgaagtttgaacaaatttatttgtctaagcctacacattgggaa
aaagatggagctccatctcctatgatgcctaatgaagcaagactaagaaatttgacatat
tctgcaccactgtatgtagatataactaaaacaattgtaaaagatggagaagatcctatt
gaaactcaacatcaaaagacatttataggaaagattccaattatgttaagatcaaaatat
tgtttacttgctggcttatctgatcgtgatttaacagaattgaatgaatgtccattagat
cctggaggctattttattattaatggttcagagaaagtactgattgcacaagaaaaaatg
gcaacaaatacagtttatgtctttagtatgaaagacggtaaatatgcatataaatcagaa
attcgatcttgtttggaacatagttcacgtcctacatctacattgtggattaatatgatg
gcaaagagtggagctagtattaaaaagtctgctataggtcaacgtattattgcaattatc
ccatacattaaacaagaaattcctattatgattgtatttcgtgcacttggatttgtagct
gatcgtgatattttagaacatatcatatatgattttgatgatcctgaaatgatggaaatg
gtgaaaccttccttagatgaggcatttgtaatacaagaacaaaacgtggctctaaatttt
attggtactagaggtgcaagacctggagtaactaaagaaaagcgtattaaatatgctaga
gaaattttgcaaaaggaaatgcttccacatgtcggcataagtgatttttgtgaaaccaaa
aaggcttactttctcgggtacatggtgcaccgtttattatcagcctctttaggtcgaaga
gaattagacgatcgagatcattatggtaataaaagattagacctagctggtccattattg
gcattcttatttagaggactatttaaaaatttaatgaaagaagtgcgattgtatgcacag
aagttcatagataggggaaaagattttaaccttgaacttgccataaaaactaaaattatt
actgatggcttgagatattcacttgctacaggaaattggggagatcaaaaaaaggctcat
caagctagagctggtgtatcgcaagtattgaacaggttaacatttgcatcaacactatca
catttaagaagagtgaattctccaattggaagagatggaaaattggccaagccgcgtcaa
ttacataatacattatggggtatgttatgtcctgcagaaacccctgaaggtgctgcagtt
ggtctagtaaaaaatttggcattgatggcttacattagcgttggatctcaaccttcacca
attcttgaattcttagaggaatggtctatggaaaatttagaagaaattgcaccaagtgca
atagctgatgcaacaaaaatattcgtaaatggttgttgggttggtattcacagagaccca
gatcaattaatggctactttacgtaaattaagaagacaaatggacattattgtatcagaa
gtatctatgataagagatattagagatcgtgaaatcagaatatatacagatgcaggaaga
atcagtaggcctttattaattgttgaaggacaaaccttattattaaagaaaagacatatt
gacatgttaaaagaaagagattacaataatgatggctggcaagaattagttggtagcgga
gttgttgaatatattgatactttagaagaggaaactgttatgattgcaatgtcccctgaa
gatttgagacaagaaaaggaatatgcatattgtacaacatatacacattgtgaaattcat
ccagcaatgattctgggagtgtgtgcctctattattccattccctgatcacaatcaaagt
ccaagaaatacttatcaaagtgctatgggtaaacaagctatgggagtatatattacaaac
tttcatgttcgaatggatactttggcacatgtactatattatcctcataaacctttagtg
actaccagatctatggaataccttaggtttcgtgaacttccagctggaattaacagtata
gttgctatattatgttatactggttataatcaagaagacagtgtcattttaaatgctagt
gctgttgagagaggtttctttagatctgtattctatagatcctataaggattcagaatcc
aagagaattggagatcaagaagagcaatttgaaaaacctacacgccaaacttgtcaaggg
atgcgtaatgctatttatgataaattagatgatgatggaattattgctcccggaattcgc
gtatcaggagatgatgtagttataggtaaaactattactcttccagaagcagatgatgag
ttggatagtacaacaaaacgttttacaaaacgagatgcatcaacctttttacgtaatagt
gaaactgggatagtagatcaagtaatgttaactttgaacagtgaaggatataaattttgt
aaaatacgcgtacgcagcgttcgtattccacaaattggtgataaatttgcttctcggcat
ggacaaaaaggtacctgtggaattcaatacagacaagaggatatgccattttcatgtgaa
ggtctcacgccagacattataattaatcctcatgctatcccatcgcgtatgactattggt
cacttaattgagtgtatacaggggaaggtgtctgctaataaaggtgaaattggcgatgct
actccatttaacgacgctgtaaatgtacaaaaaatttctacacttttacaagaatatggt
tatcaactgagaggaaatgaagtcatgtataatggtcataccggccgcaagataaatgct
caagtctttttagggccaacttattatcaacgtttaaaacatatggtggatgataaaatt
catagtagagctcggggacctgtacaaattttagttagacagcctatggaaggaagagca
agagatggaggtttacgatttggtgaaatggaacgtgattgtcaaatttcccatggagct
gcacaatttctaagagaacgtttattcgaagtatcagatccatatcggatacatatatgt
aacttttgtggtttaatcgcaatagccaatttgaggaataatacatttgaatgcaaagga
tgtaaaaacaaaacacaaatttctcaaattaggctaccatatgcggcaaaattacttttc
caagaacttatggctatgaatattgctccccgattaatggtcgcataa
DBGET
integrated database retrieval system
