Bombus vancouverensis nearcticus: 117164855
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Entry
117164855 CDS
T07628
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117164855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvan03041
]
117164855
Spliceosome [BR:
bvan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
117164855
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
117164855
NCBI-ProteinID:
XP_033204145
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MATSKSGNQQKIKLVIERNNLDEGIAKKAKIIKTNSEAPRLCPYLDTINRQFLDFDFEKL
CSVSLSKINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIID
SSLDDIKYVLNPTFDKAQIAQLDKSDKLSRAIDGSLYSPGIVGMNNIKANDYCNVILQAL
SHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAV
VLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIPPL
ELDESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNKFN
AVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFGDI
LTPEVKQRHPFTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYELQDLHVTQILPQMIT
LTEAYIQIYELKNDVYSENGNN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagtaaatcggggaatcaacaaaaaataaaattagtgatagaacgaaataat
ttagatgaaggcattgccaaaaaagctaaaattataaaaacaaattcagaagctccacga
ttgtgcccttatttagatacaataaatcgccaatttttagactttgattttgaaaaacta
tgttcagtatcattgtcaaaaattaatgtatatgcttgtcttgtatgcggaaagtacttc
caaggtagaggcacaaacactcatgcatatacacatagtgtagctgaaagtcatcatgtt
ttcttaaatttacatacattaaaattttattgtttacctgacaattatgaaataattgat
tcatcattggatgacataaaatatgttttaaatccaacatttgataaagcacaaattgca
caattagataaaagtgataaattatcaagagccatagatggatcgctatattctcctggt
attgtgggaatgaataatattaaagcaaatgactattgtaatgttattttacaagcactt
tctcatgttacacctttaagagattttttcttaagagaatctaattattctcatgtcaag
aggccacctggagactcttcttatcttttagttcaacgatttggtgaattaatgagaaaa
ttatggaatccccgtaatttcaaagctcatgtcagtccacatgaaatgttacaagctgtt
gttttatggagtaaaaagagatttcaatttactgaacagggtgatccaatcgattttctt
tcatggtttttaaatgcccttcatttagcattaaatggtacaaaaaagcgtgattctagt
atagtgtataaaacgtttttgggtcatatgcggatatatacacgaaaaataccgccactt
gaattggatgaaagtcaaagaagtgaattacttcatacggtagaatatggcgaaactgta
acagaaagcccatttttgtatttgacatgtgatcttccaccaccacctcttttcaaagac
caatttactgaaaatattattcctcaagtcaatttgtacacattattgaataaatttaat
gctgtaactgaaaaagagtataaaacatataaagaaaattttatgaagagatttgaaata
acagaacttcctccttatctcatactttatataaaaaggtttacaaagaacacattcttt
gtggaaaaaaatcccaccatagttaattttccagttaaaaatgtagattttggagatatt
ttaacacctgaagtaaaacaaagacatccatttacaacatatgatttggtagcaaatata
gttcacgatggtgaacctggtcaaggaacatatagagttcacattctacatagagcaact
ggtcagtggtacgagttgcaggatttacacgtaactcaaattttgccacaaatgataacg
ttaactgaagcatatatacaaatttatgaactaaaaaatgatgtatattcggaaaatggc
aacaattaa
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