Bombus vancouverensis nearcticus: 117164987
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Entry
117164987 CDS
T07628
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117164987
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Paralog
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117164987
NCBI-ProteinID:
XP_033204330
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All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MPIHTRKTRAACEEIEMVELCGSGQPTSAMGVMGIGSVVSAATSSSSSSTTTTAASSSAS
GRAGVLETQVRGQWYRVFVSLEDDYLSISLDESCETSNNALNNGNINNNNVDSLNDPDVP
DSVANQKRIVRVVKSDNNGLGISIKGGKENKMPILISKIFKGMAADATEQLYVGDAILAV
NGEDLREATHDEAVKALKRAGKVVELEVKYLREVTPYFRKASIIQEVGWELQRGFLSATP
PPPKSPPRADTRYLPLQLCRLTRAHPSSDPEGRILELHSPDGVHECWLRAADNAEASVWF
NALHSALAALTLKALRLASALPDPPQLQHIGWLARRHCLQNGRASSESSEDGAGSSASTS
RGAGSGFALGGGCTGGWRSVFGAVSGRELRLYECAPWSPEAWASPSITCPLIATRLVSSP
ARQNEAGSSSSGATQHAATFAVRVGTIDGVVTHHLRAETRRDLAAWARAIVQGCHAAAHS
LREYTVRCTWQGKACQLVVNHEDGFALYAAGTRGVGGNGVSPSSSPTPLWRRSFDKLKMS
ADDGARLLWLDFGGEDGEIELDLESCPKPIVFVLHNFLSAKIHRLGLSA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcccatacacacgcggaaaacgcgtgcagcttgcgaggaaatcgaaatggtcgagctg
tgcggaagcggacaaccgacttcagcgatgggagtgatggggatcggttcggtggtgtcc
gcggcaacgtcgtcctcgtcttcgtcgacgacgactactgcagcctcatcctcggcgtcc
ggacgcgcgggcgttttagaaacgcaagttcgtggtcagtggtatcgcgtgttcgtctcg
ttggaggacgattatctgagcatctccttggacgagagttgcgagacgagcaacaatgcc
ctcaacaacggtaacataaacaacaacaacgtagacagcctgaacgatccggacgtgccg
gactcggtggccaatcagaaacgtatcgtgcgcgtggtgaaaagcgacaacaacggcctc
gggatctcgatcaagggtggcaaagagaataaaatgccgattttgatctcgaagatcttc
aaagggatggctgcggacgctaccgagcaactatacgtgggcgacgctattctggctgta
aacggggaagatctgcgcgaggcgactcacgatgaggcggtgaaggcgctcaagagggct
ggcaaagtcgttgagctggaagtgaaatacctgagggaagtgacaccgtattttaggaaa
gcttcgatcatccaggaggttggctgggagctgcagcgtggattcctgagtgcgactcct
ccgcctccaaagtcaccaccgcgagcggatacacgttatctgccgctgcaactctgcaga
ctcaccagggctcatccttcctccgatcctgagggtcgaatcctggagctgcattccccg
gatggagtgcacgagtgctggttaagggccgcagacaacgcggaggcgagtgtgtggttc
aacgctctgcactcggcgctggcagctctcactttaaaggcactgcgactggcctccgcg
cttccggatccgccgcagcttcaacacatcggttggttggcgaggagacactgtcttcag
aacggacgtgctagcagcgagagcagcgaggacggagcaggaagcagcgccagcacctcg
cgaggagccggaagtggattcgcactcggtggtggatgtactggtggatggcgcagcgtc
ttcggcgccgtttccggtcgggaattgaggctgtacgagtgcgctccttggagtcccgaa
gcttgggcctcgcccagcatcacctgtccattgatcgctaccagattggtgtcgtcacca
gcgagacagaacgaggcaggaagtagcagtagcggtgcgacgcagcacgcggccacgttc
gcggtgcgagtgggcacgatcgacggcgtcgtgacgcatcatcttcgagccgagacgcga
agggatttagctgcctgggccagggcgatcgttcagggttgccacgcggccgctcactcg
ttacgtgaatatactgttcgatgcacgtggcaaggaaaggcctgtcagctggtcgtgaac
cacgaagacggtttcgcgttgtacgcagctggaaccagaggcgtaggaggtaacggggtg
agtccaagctcgtctccgactcctctctggagaaggtcctttgataaactgaagatgtca
gcggacgacggggcgcgtctactgtggctcgactttggcggcgaggatggcgagattgag
ctggacctcgagagctgtcccaagccgatcgtgttcgtcctccacaactttctctcggcg
aagatccaccggcttggcctgagcgcatag
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