Bombus vancouverensis nearcticus: 117165050
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Entry
117165050 CDS
T07628
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117165050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117165050
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117165050
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117165050
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117165050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCCH_12
zf-CCCH_RBM22
zf-CCCH_DUS3L
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
117165050
NCBI-ProteinID:
XP_033204410
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MKLMLIVYTVVNKFVIVIIDRFQTIMECLVANVDNMRFDIEIALDEQYGALPLPFTGMDK
STAAVCQFYPRGTCVKGASCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPE
CYFYSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGF
CPEGPNCKFMHPRFELPAVQDMQPKEGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVR
QEIEGNSHATHHMNMHNGPPPRGPQKPLEEVTCYKCGTKGHYANKCPKGHLAFLSHAGGS
GSATQNQNYRR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaatgcttattgtgtatacggtagtaaataaatttgtgattgtgattattgat
agatttcaaacaataatggagtgtctagtggcgaatgtggataatatgcgatttgatatt
gaaattgctcttgacgaacagtatggagcacttcctttaccttttactggaatggacaaa
tctactgctgcagtatgtcaattttatccgagaggtacatgtgttaaaggagcctcttgt
ccatttaggcatgtacgtggagatcgtacaatagtatgtaaacattggttaagaggtctt
tgtaaaaagggtgatcagtgtgaatttttacatgagtatgatatgacaaaaatgccagaa
tgttatttctattccagatttaatgcttgtcacaataaagaatgtccattcctacatatc
gacccagaaactaaagtcagagattgtccttggtatgatcgtggattttgcagacatgga
cctttatgcagacatcgacatgttcgtcgtgttttatgcatggcttatttagctggattt
tgtcctgaaggcccaaactgtaaatttatgcatccaagatttgaattaccagcagtgcaa
gatatgcaacctaaagaagggaaaaaggtaatgatcacctgtcacttttgtggagaaggt
ggccataaagcaatttattgtaataaaatgccacctgatgtacgtgaagctcaagttaga
caagaaatagaaggtaattctcatgctacgcatcacatgaatatgcataatgggccccca
ccaagagggccacaaaagccactagaagaagtcacttgttacaaatgtggaactaaaggt
cattatgccaataaatgtccaaaaggacatttagcatttttaagccatgctgggggtagt
ggaagtgctactcagaatcaaaattaccgtagatga
DBGET
integrated database retrieval system
