Bombus vancouverensis nearcticus: 117165710
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Entry
117165710 CDS
T07628
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117165710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvan03036
]
117165710
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117165710
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117165710
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
117165710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117165710
NCBI-ProteinID:
XP_033204926
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MESDDQGQVFNNEKFNGIHINGGDNSLREKVLSIRSEESIFNEASRKIDNFMKSNIKTKK
DSKELNNDNGTGTIDCSGQKKLKKQVQTGEITPFQAIEKQFDLLKTKGTFNKSSHLLDLE
KYLRQQAELAKQRKRLKENSKASKYTSNNAVTIKKPKLLNTHPKEFKIAKKTKIEANKKK
LVSEFETSKSLNKNNDINYETEDSKFNQIENSTKEAKHSKNEFISCNSSEDNTKETLIEN
TTNIKFADITNDSESEYVPSDEQIDSADEGKSCKKRKSLTKSVHTKRVLDDGNEEMYRER
VEKSGYPKDEPLHKIDNLFKIPQSIWKKLYKYQKVSVQWLWELHLRGLGGLLGDEMGLGK
TVQVIAFLAGLDCSELLSDGGRFRGLGPTIIVCPATLMEQWVKHFHEWWPILRVAVLHQC
GTYNGNLEYLMHSLKSGGVLITSYSGMLIHKDLLVTSQWHYVILDEGHKIRNPQAKISKA
VKEFSTPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAAPITRGGYTNASP
LQEAIALQVATMLRDTITPYMLRRTKNDVQHHLNLPEKNEQVLFCSLTGEQKELYKEYLR
SADVSFILHEKSNSVSRRYRARLLIALSVLRKICNHPDLFLYTNPVDSDEDIDVSNEALE
KFGYWKRSGKMIVVRSLLKIWKKQGHRVLLFTQGRQMMHVLESLVQSEEYSYLRMDGITS
MSQRQETIRLFNKDPSYFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPATDAQARARAWR
IGQNKKVTIYRLITAGTIEEKMYHRQIFKILLANKVLEDPRQHRLFKTSDLVELFNFNES
IDNNSSEIDQLFGQSRLVSSSTKFSPNKIEKMRKLAATLSKNISQNTSNSTPVIQIANAT
ENHYVSSCHNNNIDQDILKHNYEIFKDNLTKEGIRNESNLHKKNEDILFSAHQESTNDNN
IQNKISKDIEYNTDNILNNKLEDEDHTLTSRSNFDIKIHETSNKATVQCLSNDANITEIL
DRNNETVTCNVNMNEDTLPKLNKNHCKEKRKRSSRLEEHAASALFEGERVSHLIGRRLGR
SLAEEPKPIEDDQYVLEKLFAKASVTSAFQHETVLSNSEYNSDDKNPMQRLARETAQENM
DSIRKSRKWCWKPMWNSMSPKND
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgatgatcaaggacaagtttttaataatgaaaaatttaatggtatacacata
aatgggggagataacagtttgagagagaaggttttgtcaataagaagcgaggaaagcatt
tttaatgaagcatcaagaaagattgataatttcatgaaatcaaatataaaaacaaaaaag
gattcaaaagaactaaacaatgataatggaactggtactatagattgttcagggcaaaaa
aaattaaaaaaacaagttcaaactggagagattacgccctttcaagcaattgaaaaacag
tttgatttgttaaaaactaaagggacatttaataaatcctctcatttacttgatcttgaa
aaataccttcgacagcaggctgaacttgccaaacaaagaaaacgtttgaaagaaaattca
aaggcatctaagtatactagtaataatgcagtaacaattaaaaagccaaaattattaaat
actcatcctaaagaatttaaaatagcgaaaaaaacaaaaatcgaagctaataagaagaaa
ttagtttctgaatttgaaacatcaaaaagtttaaataaaaacaatgatattaattatgaa
acagaagatagtaagtttaatcaaattgagaattctaccaaagaggctaaacattcaaaa
aatgaattcatttcctgtaatagttccgaagataatactaaagagacattgattgaaaat
acaacaaacattaaatttgcagatataactaatgattctgaaagtgaatatgtaccgagt
gatgaacaaatagattcagcagatgaaggaaaatcatgtaaaaagagaaaatctcttacc
aaatctgttcatacaaaaagagttttggatgatggaaatgaagagatgtatagagaaagg
gtagagaaaagtggttatccaaaagatgaaccactacacaaaatagataatttatttaaa
atccctcaatctatatggaaaaagttatataaatatcagaaagtgtctgtacaatggttg
tgggaactgcatcttcgtggcttaggagggttactaggtgatgaaatgggtttgggaaag
actgttcaagtaattgcatttcttgcaggtttagattgtagtgaattattgtcagatggt
ggaaggttcagaggtttaggaccaactataattgtttgtccagctactctaatggaacaa
tgggtaaagcattttcatgaatggtggcctattttaagagtggctgttctacatcaatgt
ggaacttataatggtaatttggagtatttaatgcactctttaaaatctggtggtgtatta
attacttcttattctggtatgcttatacataaagatttacttgtaaccagtcaatggcac
tatgtcatacttgatgaaggtcacaaaataagaaatccacaagcaaagatcagtaaagca
gtaaaggaattctctacaccacatcgacttttgttaacgggtagccctatgcaaaactcc
ttaaaagaactatggtccctctttgattttattctacctggcaagttaggcactttacct
gcatttttagagcattgtgcagcccctataactcgtggaggatatacaaatgcttctcct
ttgcaagaagctatcgcgcttcaggtcgctacaatgcttagagatactattacaccatat
atgctccgaagaacaaaaaatgatgtgcaacatcatcttaatctaccagaaaagaacgaa
caggtactgttttgcagtttaacaggagaacaaaaggaattatataaagaatatttacgt
tctgcagatgttagtttcattttgcatgaaaagagtaattcagtaagcagaagatacagg
gctcgcctcctcatagcattatcagtgcttaggaagatatgtaatcatcctgatttgttt
ctttatacaaatccagttgattcagatgaagacattgatgtatcaaatgaagcattggag
aaatttggatactggaagcgctctggtaaaatgatagtggttcggtcccttcttaaaatt
tggaagaaacagggacatagagtacttctttttactcaagggagacaaatgatgcatgtt
ttagaatctctagtacaaagcgaagaatattcttatttaagaatggatggaattacttct
atgtcacaacgacaagaaacaattcgtttatttaataaggatccatcatattttgtgttt
ttgttaactacgcgtgttggaggtctgggagtaaatttgactggagcaaatcgagtagtt
atttatgatccggattggaatccagcaactgatgctcaagcaagagcacgtgcatggaga
attggacaaaacaaaaaagttaccatttatagacttattactgctggtactattgaagaa
aagatgtatcacagacaaatatttaaaatacttcttgcaaataaggttttagaagatcca
cgtcaacatagattatttaaaacttccgatttagttgaactttttaattttaatgaatct
atcgataataattctagtgaaatagatcaattattcggacaatctagactagtttcttcg
tctaccaaattttcacctaataaaattgaaaaaatgcgaaaattagcagctacgcttagt
aaaaatataagtcaaaatacctcaaactctacacctgtaatacaaatagcaaatgctaca
gagaatcattatgtttcaagttgccataataataatattgatcaagatattttaaaacac
aattatgaaatattcaaggataatttaacaaaagaaggtattagaaacgagagtaatctt
cataaaaaaaatgaagatatacttttttctgcacatcaagaaagtacgaatgacaacaat
atccaaaataaaatttcaaaagatattgaatacaatacagacaacatcttaaataataaa
ctggaagatgaagatcatacattaacaagtagatcaaattttgatattaaaatacatgaa
acatcaaataaggctactgtacaatgtctatctaatgatgctaatataactgaaatttta
gatagaaataacgaaacagtaacatgtaatgtgaatatgaatgaagatacgttgccaaaa
ttaaataaaaatcattgcaaagaaaaaagaaaaagaagttcacgattagaagagcatgct
gcctcagctctatttgaaggagaacgtgtctcacatttaattggacgacgtcttggacgt
tctctggccgaggaacctaaaccaattgaagatgatcaatacgtcttagaaaaattattt
gccaaagcgagcgtgacttctgcttttcaacacgagacagtattatcaaattcagaatat
aattctgatgacaaaaatccaatgcaacgattagcgcgcgaaacagcgcaagaaaatatg
gacagtattcgtaaatctcgtaagtggtgttggaagcctatgtggaattctatgtcacca
aaaaatgactga
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