Bombus vancouverensis nearcticus: 117165791
Help
Entry
117165791 CDS
T07628
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117165791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117165791
03012 Translation factors [BR:
bvan03012
]
117165791
Enzymes [BR:
bvan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117165791
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117165791
Translation factors [BR:
bvan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117165791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
ResIII
AAA_14
NPHP3_N
ATPase
AAA_19
PhoH
ABC_tran
NB-ARC
NACHT
Sigma54_activat
T2SSE
AAA_16
AAA_23
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
117165791
NCBI-ProteinID:
XP_033205058
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MSRPYGLFSAQRMYSRHRYGDKGESSQSGGSHFERDSHGRGRGGGHPPWLRGKEIGLYYR
DKAKQKSKKKETRGIKLPEHLQEKIEHVLNNSKGYYEKLYNNTYTEDTYDVLENKYVHIR
DSQFKRKFMNMVSGNMQENLATALLVKSKLERDIELDKKLLNEHRTLQSTQVYENMKQFR
LKLPSYHKRSKILDLIKENQVIVISGETGCGKTTQVAQYILDDQIEQENGSIVRIICTQP
RRISAISVAERVAAERAERLGKSVGFQIRLEKVLPRDKGSITFCTTGMLLQFMQGDPALK
EFSHIILDEIHERSTESDFILALLKLIIPKRPDLKVILMSATLNSERFSSYYNDCPMIHI
PGFTYPVTEFYLEDILSFTEYQFPASTAIPQDHRKHIKKYKQEQRKRDEFHDVLYPYIRQ
LIATKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTSDPGAILVFLPGMMDIIKLHKI
MLENRQYPQNQYVIYPLHSRMPTVDQKLVFKTPPEGVRKIIIATSIAETSITIEDVVYVV
DCGKMKFGKFDLQKNVQTLEPEWVSLANAKQRRGRAGRVRPGVCYHLYSKAREMALDQYP
LPEMLRTRLEEVILQIKMLQLGKARTFLASVMDPPNMKAINLSLDLLRTLNALDDEEQLT
PLGYHLAQLPLDPRTGKMIIWASLFSCVEPVFAIAASLSFKDAFYCPLGKEEDARKKKLE
LNMNQFSDHIALSEALRRFEIAYKKSYASSFCREYFLSFSTLKLLSEMKTQFAQHLCRMK
FMDSENPADINANRNSSNITLVKAVVCAALYPNIAVIRRVTKNGTRAWTPEDGSVTIHPS
SVNDRVREYPNPFITYFTKQLSTAIYLHDTTCVSAPILLFTAPKMSIRKERGNYFISLAN
NQMFACDLQSAQLIQKLQEQFNNMLEYKITHPGTVCWNSFEGDVLNAIIELVSQKDEELG
FSNSDIQNCEDDIHDKV
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccttacggactattttcagcacaaagaatgtattcgagacatagatatgga
gataaaggtgaaagttctcagtcaggaggatcacattttgaacgtgacagccatggacga
ggcagaggaggaggacatccaccttggttgagaggcaaagaaatagggctttattataga
gataaggccaaacaaaagtccaagaaaaaggaaactcgaggtattaagttacccgaacat
cttcaagaaaaaattgaacacgtgttaaacaattctaaaggatattatgaaaaattatat
aacaatacatacactgaggatacatatgatgtgttagaaaataaatatgtgcacattcgt
gactcccaatttaaaagaaaattcatgaatatggtatctggtaatatgcaagaaaatctt
gccacagctttgctagttaaatcaaaattagaaagagatattgaactagataaaaaatta
ttaaatgaacataggacattgcaatcaacgcaggtatatgaaaacatgaaacaattcaga
ttaaagttaccatcatatcataaaagatcaaaaatattagatttgattaaggaaaatcag
gttattgtaataagtggagaaactggttgtggaaaaacaacacaggttgctcagtatata
ttggatgatcaaatagaacaagaaaatggtagcattgtgcgaattatatgtactcaacct
aggaggatatcagctatatctgttgctgagagagttgcagctgagagagcagaaaggctt
ggtaaatccgttggttttcaaatccgacttgaaaaagtattaccgagagataaaggcagc
ataacattttgtactactggaatgttattgcaatttatgcaaggtgatccagccttaaaa
gaattttctcatattatattagatgaaattcatgaaagatctactgaaagtgacttcatc
cttgctttactgaaactaattatccctaaaagacctgatttgaaagttattttaatgagt
gcaacacttaactctgaaagattttccagttattataatgattgcccaatgattcatatt
cctggctttacttatccagtaacagaattttatttagaggacatcctatcctttacagaa
tatcaatttcccgcatcaactgcaatacctcaagatcatagaaaacatatcaaaaaatat
aaacaggaacaacgaaaaagggatgagtttcacgatgtgctatatccctatatacgacag
cttatagctacgaagaaatattcaaaagaagtaattgaacaattacggaatccaaacagc
gagaaattgtctcttgatctcatagaacaattagttaggtacatttgtaaaactagtgat
cctggagctattttagtttttcttcctggtatgatggatataataaagctacataaaatt
atgctggaaaatagacagtatccacaaaatcagtatgttatttatcctcttcattctcgt
atgccaactgtcgatcagaagctcgtatttaaaacaccacctgaaggagttcggaagata
ataattgcaacttcgatagccgaaacttctataactattgaagatgtagtatatgttgtt
gattgtggaaaaatgaaatttggtaaattcgatctccaaaaaaatgttcaaactttggaa
cctgaatgggtatcgttagctaatgctaaacaaagaagaggtagagcaggcagagtaaga
cctggtgtctgttatcatttgtactcaaaagctagagaaatggcactagaccagtatcct
ttacccgaaatgttaaggacgcgtttagaggaagttattttacaaataaaaatgttacaa
ttgggaaaagctagaactttcttagcaagtgttatggatcccccaaatatgaaagctata
aatctatctttagatttactccgaactctcaacgcgttggatgacgaggaacaattgact
cctttgggatatcatttggctcaattacctctagatccacgtacagggaaaatgatcata
tgggcatcattattttcgtgtgtagaaccagtttttgcaatcgcggcgagtcttagtttt
aaagatgctttttactgtccacttggaaaagaggaagacgcacgaaaaaagaaactcgaa
ttaaatatgaatcaatttagcgatcacatcgcgttatctgaagcattaagaagattcgag
atcgcgtataaaaaaagttatgcaagttctttttgtagggaatatttcctctcttttagt
acgctcaaactactttctgaaatgaaaactcaatttgctcaacatttgtgtcgaatgaaa
tttatggactcagaaaatcccgctgatattaatgctaacaggaactccagtaacataacc
ttagtgaaagcagtagtatgtgctgcattgtatcctaatattgctgttataaggagagtt
acaaaaaatggaaccagagcatggactccagaagatggcagcgttactatacatccgtca
agtgtaaatgatagagttagggaatatcccaacccatttattacatattttacaaagcaa
ctctcgacagcgatatatttgcatgatactacatgcgttagcgcgccaattttattattt
actgctccaaaaatgtctataagaaaagaaagaggaaactattttatcagcttagcaaac
aatcaaatgtttgcttgcgatttgcaaagtgcacaacttattcagaaattacaagaacaa
ttcaataatatgttagagtacaaaataacacatccgggaacagtatgctggaatagcttt
gaaggcgatgtattgaatgctatcatagaactggtttctcaaaaagacgaggaattggga
ttttctaattctgatattcaaaattgtgaggatgatattcatgataaagtttga
DBGET
integrated database retrieval system
