Bombus vancouverensis nearcticus: 117165908
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Entry
117165908 CDS
T07628
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvan04131
]
117165908
Membrane trafficking [BR:
bvan04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117165908
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117165908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_IFT140_1st
Lgl_C
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Synaptobrevin
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_like
KNTC1_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
117165908
NCBI-ProteinID:
XP_033205303
LinkDB
All DBs
Position
Unknown
AA seq
1347 aa
AA seq
DB search
MKKFTIKGVLDGFRSSVPQPVKPDQEIVENLRPEHFQVKKTFRHGFPHQPTAVAFDPVQR
LLAIGTKSGSLRILGRPGVDAHVRHEGCTAVVQLQFLINEGALVSATADDTLHLWNFRQK
IPQVVQSLKFQRERITCIHLPLQSKWLYVGTERGNIHVLHIETFVLSGYVINWNKAIEVS
RKTHPGAVVHLSDNPLDLSKMLIGYESGQMVFWDLKTKNAEYRCHSDVPLKSISWHHEGK
QFMCSHTDGSLATWTVRQVKPTNITHPHAKTTKDGEPEPCKPIQKVEWKLSRSGEAYVIF
SGGLAYDTTGRTPSITVIHGKTTTVLEMEHNVIDFITLCENPWTSDYQDPYAVVVLLQND
LVVIDLLTPGFPCFENPYPMDIHESPVTCCAYFADCPSDLVPAFYSVGSKSQKKTGFSDK
DWPISGGEWSSSSSGYNEIILTGHADGSIKFWDASAGTLQVLYKLKTAKLFEKGRTRSID
SEEDPLAIQLIFLCPESRKLAIAGSGRHVVLFKFKKVESMSEVVTLEISLTADPAKEIES
SSDHDSPAGNTSGSSESKNNESNQPLKVKTGLQKRAAGFQATLVCLTIANIGEQAENITA
LSLNSSYGLMAYGNESGIVIIDIVQKISLIVLNTADIGGNTDPCQRVLRSPKRQDELKRE
NEDKARSPSTDQTHGDSTVESEGLLAILADNVQHSQPRGEFHTGSKNEKGTVEESVNETN
KSGGTVNEEDCTKNHGWKGFSLKRQLSKVDLKIKSTFTPTLVTSQNGVGTDSSSQKSSVF
YCNIPENASSLSPVESTVSESSLSSEGSIPGRESPLNDDKKRNNQEAKSPVIEGDKNKSI
LRFSTDNENVIEKSDAVRPVNLTLAESCEMKPPRLMKIVKMKQAKREGRLLSVPNLKFAK
NDPAICDLRCEETNTASESFTCNLIRRFSRVDKYDSSFQRSRSSSMSSLENITTETISCL
TFADSYTKKSDTSPVPTLWIGTSLGSIQTVIFNTPARGERHAHPVVVSTCNGSTFKLKGC
ILSMFFLDCNGALIPYSYESWKDDSMESKERNRSQGKCNSRTSSPSMNTQVATGEGFEDR
QFVVLASEKQARVVALPSQNCQYRQQLAESHIVIKAEITSLKDNVCLVCYISNGHIATYS
LPSLRPLIDVDFLPLIDLSFQTTKHGIVDPMLSIWGHQLFVNGDTDQIAKTLCFSNRGHG
LYLSSPTEIQKFSVSSQFCGELTEMMGDLFTGHDMPEPPKESFFKGLFGGGSRSLDREEL
FGESSGRASRTVAKHIPGPNAATENMRERVTTATGEVNVAHQMVLERGEKLSQLEERTGR
MMSEAEGFSQSAHGLMLKYKDKKWYQL
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttacaattaaaggcgtgctcgacgggttccgatcatcggtaccgcaaccc
gtcaaacctgatcaggaaatcgtcgaaaatttacggccagaacattttcaagtaaagaag
acattcagacatggctttccacatcagccgacagcagtggcattcgatccagttcaaaga
cttcttgctattggcactaaatctggatctcttaggattttgggtcgaccaggtgtagat
gcacatgtaagacacgaaggatgtacagcagtggtacaattacagtttttaatcaacgag
ggagcattggtttccgctactgcagatgacactttgcatctatggaatttccgacagaaa
ataccacaggttgtgcagagtctcaaatttcaaagagaaagaataacatgcatccactta
ccgctacaaagtaaatggttatatgtcggtacggaacgggggaatattcatgtgcttcat
atcgagacgtttgttctttctggatatgtaattaattggaacaaggctatcgaagtatct
agaaagacccatcctggtgctgtagtacacttgagtgataatcctttagatttgagcaag
atgctgataggatatgaatcgggacaaatggttttttgggatttaaaaacaaaaaatgca
gaatacagatgccacagtgacgtacctttgaaatcgatatcttggcatcacgagggtaaa
cagtttatgtgtagtcatactgatggttctttggcaacatggacggtgcgtcaagtaaag
ccaacgaatataacgcacccacatgcgaaaactactaaagatggcgagccagaaccttgc
aaaccaattcaaaaagttgaatggaagctgtcaagatcaggggaagcatacgttatattt
tccggtggtttagcgtatgacacaactggccgaactccaagtataacggtgatacatggg
aaaactaccaccgtactagaaatggaacacaatgtgatagacttcataacactgtgcgaa
aatccatggaccagtgattatcaagatccgtatgctgttgtagttctactacaaaacgac
ttggttgtgatagatttattaactcctggatttccgtgttttgaaaatccatatccgatg
gacatacacgagtcacctgtgacatgctgtgcgtattttgctgactgtccttcggatcta
gtaccagctttttattcagttggatcaaagtctcaaaaaaagacagggtttagcgataag
gattggccaatatccggtggggaatggagctcaagctcaagcggatataatgaaattatt
ttaactgggcacgctgatggtagcataaagttttgggatgcatcggcaggcacgttacaa
gtgctttataaactgaagacagcgaaactttttgaaaaaggtagaacacgtagtatagac
tcggaagaagatcctttagcgatacaactcatcttcctttgtcccgaaagtcgaaaatta
gcgattgcgggtagcggaagacacgttgttttatttaaattcaaaaaagttgagagtatg
tcggaagtcgtgactttggagatatcactaacagctgatccagctaaggaaatcgaaagt
tcatccgaccatgattctccagctggtaatacttcgggaagtagcgagtcaaaaaataac
gaatcgaatcaaccacttaaagttaagactggtttacagaagagggctgcaggctttcag
gcaaccctggtttgcttaacgattgccaatatcggagaacaagctgaaaatataacagct
ctcagtttgaattcttcctatggtttaatggcttatgggaacgagtctggtatagtgata
atagacattgttcagaagatttctttgattgtgttgaacaccgcggatatcggtggtaac
acggacccgtgtcagcgagtactacgcagtccgaaacgtcaggatgaattgaaacgagag
aacgaagacaaagcgagaagtcctagcacagaccagactcatggagactctaccgtggaa
tctgaaggcttattagcaatcctagctgacaatgttcaacattcgcaacctcgcggtgaa
tttcatactggaagcaagaatgagaaaggaacagtagaggaatctgtaaatgaaaccaat
aaatctggaggcacagtgaacgaagaagactgtactaagaatcacggttggaagggattc
agtctgaagaggcaactcagcaaggttgatctgaaaataaaaagtactttcacgccgact
ttggtgacgtctcagaatggggtaggcactgatagtagcagtcagaaatcttccgttttt
tactgtaacatacccgaaaacgcgagttcgctgtctccagttgaaagtaccgtgtctgaa
tcttcattgtcatcagaaggctcgatacctggacgtgaaagtccattaaacgatgataaa
aagagaaacaatcaagaagcgaaaagtccggtgatcgaaggagataaaaataaatcgatt
ttacgattttccactgacaatgagaacgttattgagaaatcggatgccgtacggccggtt
aatttaacgttagccgagagctgtgaaatgaaaccaccgagactgatgaaaatcgtgaag
atgaagcaagcgaaaagggaaggtcgtttattgtctgtaccgaatttaaaatttgcgaaa
aacgatccagcgatttgtgacctaagatgcgaggaaacaaacacggcctccgaatctttc
acctgcaatctaataagaagattcagtcgggtagacaaatatgacagttcgtttcaacga
tcaagaagctcgagcatgtcgtcgctcgagaatatcaccacagaaaccatcagctgcctt
acattcgcagattcctacacgaaaaagagcgataccagtcctgtgccaacactttggatc
ggtacatccttaggatctatacaaacggtgatatttaatacacctgctcgtggagaacga
cacgctcatccagtcgttgtttctacctgcaatggatctacgtttaagttaaagggatgt
attctatcaatgttcttcttagattgtaatggtgccctgattccatactcttacgagtcc
tggaaagacgacagtatggagagtaaagaacgcaatagaagtcaaggcaaatgtaatagt
cgaacgtcttctccatcgatgaacactcaagtagctacaggagagggcttcgaagaccgc
caattcgttgtattagcgtcagagaaacaagcgagggttgtagcattaccctcgcaaaat
tgtcagtacagacaacaactggctgaaagtcatattgtgattaaagcagagattacgtct
ttaaaagacaatgtctgtcttgtatgttacatttcaaatggtcacatagctacttatagt
ttgccaagtctgaggccgcttatagacgtcgattttctaccgcttatagatttgagtttt
cagactacaaaacatggcattgtagaccccatgttgtccatatggggtcatcaactcttt
gttaatggcgataccgatcaaattgcaaagacactttgcttcagcaataggggtcatggc
ttatatctctcgtcgcccactgagatccaaaagttttctgtatccagtcaattttgtggt
gaattaactgaaatgatgggagacttgtttaccggccacgatatgcctgaaccacctaaa
gaaagtttcttcaaaggcctcttcggcggaggatcacgaagccttgatagagaagagcta
tttggtgaatcaagcggtcgagcttcccgtacggttgcaaaacatataccaggaccgaac
gcagcaacggaaaatatgcgagaacgtgtgacaacagcgacgggagaagtaaacgtggct
catcaaatggttctcgagcgaggtgagaagttgtcacaattggaggagcgaacaggacgc
atgatgtccgaagctgagggtttctcgcaatctgctcacggattgatgctcaagtacaaa
gacaagaaatggtatcagctatga
DBGET
integrated database retrieval system
