Bombus vancouverensis nearcticus: 117166420
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Entry
117166420 CDS
T07628
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117166420
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117166420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
DUF4618
IFT57
SMC_hinge
DUF948
ABC_tran
AAA_27
FliJ
Motif
Other DBs
NCBI-GeneID:
117166420
NCBI-ProteinID:
XP_033206272
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MSNNDIDKGIITYIYLENFVTYDKVCVKPGRNLNVIIGPNGTGKSTIVCAIVLGLGGKPT
TIGRAIHVADYIKRGCDEAKIEIHLKNGKGNDIVIRRIFNKCGKSFWFLDNRQTGIKEIQ
ELTTSLNIQIDNLCQFLPQDKVQDFSKMNAQELLENTERSVCNPIIVERHKNLIQYRIDH
KDLEKQIESKKKSLESKTQIYDSLKESVSSIKEKKLIKEKILHLKQKKAWILYEQRRKEL
VKLKDMKNAAQAEVAHLEAEIKPVNDAITQMKSEIQSLQTCLSDHKNKVKIKDMKLKKMM
DNIVDYENDVKDCENSCKQRIQIEEARDHDIDIAQKQKKKLDNDLLLMLKDIGSEEILVK
QRQEIISDIEKKRNIINMLVGQASESKQKEDQLNLEIASQEAELQALNIEAKRLQLLRER
SVDTYKAVQWLRENRNKFSNMIHEPILLNMNVKEASYAKYLENIIPFRDMIAFVCEDKQD
MNMLLHYLRDEHNLQVNVVHSDPAKDVSMNPIVPLQHIKQFGFTHYLVSLIEAPSTIMKY
LVSMYNLNNIPIGKNQVDDNIDRIPNNIRCYFSQNNVYMVNRSKYTGEKSIGMQPVSGTG
MLSIVLDRSRMLNIEEKLKVLREKKNKVSNKLKQLDEQVHEQNKELDKIKATRNKYQQDL
QQIQTLKSKIYIVEKKVVDLQNGRTTVEEIKKSSTKEIKKIMEKQIKIYKAYNTELVESV
ECIMDSETTDYVLTLRNRSLRMKINNSHDLRERLKEAEDKVKQLCQELQPLKYEVQRIFN
QALQTTNGISASDSAFAPIKKIFNKLPPTIEEINNELNIAQAKMFCMGNNIDGENILQEY
EQVEQDINQLKDSIQSKTQELQKTTQNIESLRKEWLTPLSQTIEKINSNFSMYFSAMDCA
GEVVLAQPENRMEFDQYGLKIRVKFRNTDQLQELTRYHQSGGERAVTTAIYMIALQELSR
VPFRCVDEINQGMDAVNERRVFNLLVKMTGRANSSQYFLLTPKLLPDLQYSETVTVHCVF
NGAFMINHTEFDTEKYCEFIVGAMERECTDDD
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataacgatattgataaaggaataattacttatatttatttagaaaattttgtg
acttatgataaagtttgtgtaaaacctggtaggaacttaaatgttattattggccctaat
ggcactggtaaatcgacaattgtttgtgcgattgtgcttggattgggaggtaaacctacc
accattggtcgagctattcatgttgcggattatataaaaagaggatgtgatgaagcaaag
attgaaattcatcttaaaaatgggaaaggcaacgatattgttattcgaagaatatttaac
aaatgcgggaaatctttctggttccttgataatagacaaacaggtattaaagaaatacag
gaattaacaacaagtcttaacatacagatagataatctttgccaatttctcccacaagat
aaagtacaagatttttcaaagatgaatgcacaagaattgttagaaaatacagaaagatct
gtttgtaatcccattatagtcgaacgtcacaaaaacttgatacaatataggatagatcat
aaggatttagagaaacaaattgaaagtaaaaaaaagtcactagaatcgaaaactcagatt
tacgatagtttaaaagaaagtgtcagtagtataaaagaaaagaaattaataaaggagaaa
attttacatttgaaacagaagaaagcatggatactatatgaacaaagacgtaaagaacta
gttaagttaaaagacatgaagaatgctgcacaagctgaagtggcacatttagaagcggaa
ataaagcctgttaatgacgcaataacacaaatgaagtcagaaattcaatcgcttcaaact
tgtctttcagaccataaaaataaagtcaagatcaaagatatgaaactgaagaaaatgatg
gacaatattgtagactacgaaaatgatgttaaagattgcgaaaattcatgcaagcaaaga
attcaaatagaagaggctcgagatcacgacattgatattgcacagaaacaaaaaaaaaaa
cttgataacgatttattactaatgttgaaagatattggatctgaggaaattttagtgaaa
cagcgccaagaaataatatccgatatagaaaagaaaaggaatatcattaatatgttagta
ggccaagcttcagaatcaaaacaaaaagaagaccagctaaaccttgaaattgcatctcaa
gaagcagaactacaagctctcaatattgaagcaaaacgattacaattgttaagggagaga
agtgttgatacatataaagcagtgcagtggctgagggaaaatcgtaacaaattttcaaat
atgatacatgaacctatattacttaatatgaacgtgaaggaagcttcttacgcgaagtat
ttggaaaatatcattccatttcgggacatgatagcatttgtttgtgaagataaacaagat
atgaacatgttattgcattacttaagggacgagcacaatttacaagtaaacgttgtacat
tccgatcctgcgaaagatgtttctatgaatccaattgttccattgcagcacattaaacaa
tttggctttactcattacttagtatcgctgattgaagctccgagcaccattatgaaatat
ttagtgtctatgtataatttaaacaatatacccataggaaaaaatcaagttgatgataac
atcgatcgtatacctaacaatatacgttgttactttagtcaaaataatgtatatatggta
aatagatctaagtacactggagaaaaatctatcggaatgcaaccagtatcgggtacagga
atgttatctattgtgttagatagatcaagaatgttaaacattgaagaaaaattgaaagta
ttacgagagaagaaaaacaaggtaagtaataaacttaaacagcttgatgagcaagtacat
gaacaaaataaagagttagataaaataaaagctaccagaaacaaatatcagcaagatctt
caacaaatacaaactctgaaatctaaaatatatatagtggagaaaaaagttgtagattta
caaaatgggcgaaccactgttgaagaaataaaaaaatcttctactaaagaaataaagaaa
attatggagaagcaaataaaaatatataaagcatacaatactgaattagtagagtctgtt
gaatgcattatggacagtgagacaaccgactatgtattaacattgcgtaatcgatctttg
agaatgaaaataaacaattctcacgatttaagagagcgactcaaggaagcagaagataaa
gtgaagcaattatgccaggaattacaacctctgaagtacgaagtacaaagaatatttaat
caagcattgcaaactaccaatggtatcagtgcctcggacagtgcgtttgcacccataaaa
aagatattcaataaattgccgccgaccatagaggaaattaataatgaattgaatatcgcg
caagcaaaaatgttttgtatgggaaataatatagacggagaaaatatattacaagaatat
gagcaagtagaacaagatataaaccaattaaaagattcgattcagagtaaaacacaagaa
ttacaaaaaactacacaaaatatagaatcgttacgaaaagaatggttaacgcctttatca
caaaccattgaaaaaattaattctaatttcagtatgtatttctcagcaatggattgtgct
ggtgaagttgtattagcacaaccagagaatcgtatggaatttgatcagtatggtctcaag
attagggtaaaattcagaaataccgaccaattacaagaattaacaagatatcatcaaagt
ggtggagaaagagctgtaactactgctatttatatgattgcacttcaggaattgtcaaga
gtaccatttcgctgtgttgatgaaattaatcagggcatggatgctgtaaatgaaagaaga
gtatttaatttgcttgtgaaaatgactggacgagcaaatagttctcagtattttttactc
acaccaaagttactaccggatttacaatattcagagacagtgacggtccattgtgtgttc
aatggagcgttcatgattaatcatacagaatttgatacagaaaagtattgtgagttcatt
gttggggcaatggaaagagaatgtacggatgacgattga
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