Bombus vancouverensis nearcticus: 117166638
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Entry
117166638 CDS
T07628
Name
(RefSeq) neuronal PAS domain-containing protein 4 isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bvan03000
]
117166638
Transcription factors [BR:
bvan03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117166638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
bHLH_NPAS4
PAS_3
PAS_9
PAS
PAS_4
HLH
PAS_2
HEXIM
Motif
Other DBs
NCBI-GeneID:
117166638
NCBI-ProteinID:
XP_033206685
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MFNRIDASKSTKGASKLRRDLINAEIANLRDLLPLPPSTRQRLSQLQLMALVCVFLRKAN
YFQQALKNCPSDSSNIPTPNIGFSKAMSGFIMMMTQQGKLLYISENAAEYLGHSMEDLLI
HGDSVYDVIDKQDHMVVQNQLSRNSPIPSDRRLFLCRINVSRNSRRQLRFGDQKVVLVEG
HFLPFVPVCNRNEFVFLASCTPVVLPETRESIVQGATNIFTTIHSMDMKYLHIDKTAESH
LEYTRNELVNMSWYNLLHWDSIRTAYCKHQTVIQSDQERSATALLRLQSRSGRWFWVHCV
LQVKDTSEECQHPIIVCTNQVLSDREAEVMRSSSWLYQYSSQTKFTYTICSGSQNRGVPY
ATGSQSNQQQDYSRSLSHAHNNDTQHSPDIRNSDQDPHNSSKTQLKDYATRNPREDAEPV
DMSISSSEHENRNVHMNIQHGHYALGQFTDRYKAHHKNSLNLSGYRAKFMQCHSQYSMDT
LSPKYYITDLDKEYCCNERNSSHKRLPGKALSTTTGSTADPSELPMEHWNSSPVWSDTLQ
RVPDVVHQELSPYVATPTTPVDTPDSELHPETPIFNFDWAAEQHVPNLKITFRSSNQGPR
KVQDVQPITLQLPRKKGQSMNDSKDFPK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcggatagatgcgagcaaatcaacgaaaggtgccagcaaacttcgaagggac
ctgataaatgccgaaatcgccaacttacgtgatttactgccattaccgccctcgactcgt
cagaggctttcccagttacagcttatggccttggtctgcgtatttcttcgaaaagccaat
tactttcaacaagccttgaaaaactgtccgtccgactcttcgaatatcccgacccctaac
attggattttcaaaagccatgtccggatttataatgatgatgacccagcaagggaaactg
ttgtatatatcggaaaatgcggcagaatatcttggacactctatggaggatttgcttatc
cacggggatagtgtttacgacgtaatagacaagcaagatcacatggttgtacaaaatcaa
ttatctagaaatagtccaattccaagcgatagaagattgtttctttgtcggatcaacgta
tccaggaattctcggaggcaacttcgtttcggtgatcaaaaagtggttttagttgaaggc
cattttttacctttcgttcctgtttgtaatcgaaatgagtttgttttccttgcttcctgt
acacccgttgttttgccagaaactagagaaagtatcgtgcagggcgcgacaaatattttc
accaccattcactctatggatatgaaataccttcatatcgataaaactgctgaaagccat
ttggaatacacccgtaacgaattagtaaatatgtcatggtataatttattacactgggat
tcgatacgaacagcatattgcaaacatcagactgttattcaatctgatcaagaacggtca
gcaactgcattgttgagactgcaaagccgttccggacggtggttctgggtgcactgcgtt
ttacaagtcaaagatacttccgaagaatgtcaacatcctatcattgtgtgcacgaatcaa
gttctgagtgacagggaggcggaagtcatgcgttcaagttcctggctgtaccagtattca
tcccaaactaaatttacttacaccatctgctccgggagtcagaaccgcggtgtgccatat
gctaccgggagccaaagtaatcagcaacaagattacagtcgttccttatcccacgcacat
aacaacgacacgcaacattctcctgatatacgaaattcagaccaggatccgcacaattcg
tcgaagacacagttaaaggattacgcaactagaaatccacgagaggatgcagaaccggtt
gatatgtcgatcagtagtagcgagcatgagaataggaacgtacacatgaatattcaacat
ggtcactatgcgcttggtcaattcaccgataggtacaaagcgcatcataaaaattcatta
aatttgagcggttatcgcgcaaaatttatgcaatgtcacagccaatacagtatggacacg
ttgtcgcccaagtactatatcacggacttagataaggagtactgttgtaacgagaggaat
agcagccataaacgacttccgggtaaagcgttatccacgacgacaggatcgacagcagat
ccgtcggagttacccatggaacattggaattcgagtccagtttggtcggacactttgcaa
agggtaccggatgtcgttcaccaggaacttagcccatacgtagcgacgccaactacgccg
gtcgacactccagactccgagctacatccggaaactccaatttttaatttcgattgggcg
gccgaacagcatgtgcccaatttaaagatcacgtttcgtagctcgaatcaggggcccagg
aaagtccaggatgttcaacccatcacgttgcagttaccacggaaaaagggccagtccatg
aatgattctaaagactttcctaaataa
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