Bombus vancouverensis nearcticus: 117166758
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Entry
117166758 CDS
T07628
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117166758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117166758
04121 Ubiquitin system [BR:
bvan04121
]
117166758
03036 Chromosome and associated proteins [BR:
bvan03036
]
117166758
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117166758
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117166758
Ubiquitin system [BR:
bvan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117166758
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117166758
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117166758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_4
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
PTCB-BRCT
zf-C3HC4_2
DUF2039
Motif
Other DBs
NCBI-GeneID:
117166758
NCBI-ProteinID:
XP_033206922
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MDTSWKNTRDALKDFANMLKCNKCGNEPINATRYTSCGHFFCKQCVGNDSLCIICKIPVQ
PIETCSDHVIESLVSHCNNIAEIIQERDLWNAATTSNSIQSPNRINSTVCNLKYRIPKKN
INKQNSKGETQLHTACLKGKIQEDHIKFLLAAGANPNTKDYNGWTPLQEVVSYGYSDICY
LLLKCGALPNTPGEGNRTALHEAAKANRLSEAKLLLKYSANKNVYDDYGKRPIDYCEPYS
RMWNILKDENELENNLETTKDLSHTLNKSLSMAFDMVVIYMSDLQEKNKRHLNEIASKNK
IKIVSRFQSSVTHVIVEANSENVVQPSYDVMMALLHGAWLLNTEWIQLGMDISEILKGDL
EIFEVSGTPIKGIPKKARENAQKQNPGLFNRCYFYFAWQSKNVYANGIQLTKEALIALVQ
EGGGTVLKREPNPENIKDQGLFIPFHIANEPTHSLYKCTHYIIYVPEKDEPRIKYNMPHI
KTLPLIWLIECIEKFTLIDPLQLGLLKL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcatggaagaacactcgtgacgctttaaaagactttgcaaatatgttaaag
tgtaacaaatgtggaaatgagccaataaatgcaacaagatacaccagttgtggtcatttc
ttttgtaaacagtgtgttgggaatgattcactatgtataatatgtaagatacctgtacag
cccattgaaacatgtagcgatcatgtaattgagagtcttgtatctcattgcaataatatt
gcagaaataatacaggaaagagatttatggaatgcagccacaacttcaaattcgatacag
tcacctaacagaatcaattctacagtatgtaatttaaaatatcgcataccaaaaaaaaat
attaataaacagaacagtaaaggagaaacacaattacatactgcgtgtttgaaggggaag
atacaagaagatcatataaaatttctattagctgctggtgcaaatccaaatacaaaggat
tataacggttggactcctttgcaagaagttgtaagttatggttatagcgacatatgttat
ttactactaaaatgtggtgcattaccaaatacacctggtgaaggaaacagaacggcgtta
catgaagctgctaaagcaaatagattgtcagaagcaaaactgctattaaaatattcagct
aacaaaaatgtgtatgatgattatggaaaaagacctatagattattgcgagccatacagt
aggatgtggaatattttgaaagatgaaaatgaattggaaaataatcttgaaaccaccaaa
gatcttagtcatactttaaataaatcactttccatggcatttgatatggttgttatatat
atgtcagatttacaagaaaagaataaaagacatctgaatgaaatagcgtcaaagaataaa
attaaaattgtatctagatttcaatcatctgtgactcatgtcatagtagaagctaatagt
gaaaatgtcgtacaaccgtcatatgacgtaatgatggcacttttacacggagcttggtta
cttaataccgagtggattcaattaggaatggatataagcgaaatactaaaaggagattta
gaaatatttgaagttagtggcacaccgattaaaggtatcccaaagaaagctagagaaaat
gcacaaaaacagaatccaggtctcttcaatcgatgttatttttattttgcgtggcagtca
aaaaacgtttatgcaaatggtatacaattaacaaaagaggcattaatagcactagtacaa
gagggtggtggaacagttttgaaaagagaaccaaatccagaaaatataaaagaccaggga
ttatttattccttttcacattgcgaatgaacctactcattctttatataaatgtacacat
tatatcatatatgtaccagaaaaagatgaaccacgtataaaatataatatgcctcatata
aaaacacttccgcttatatggctaattgaatgcatagaaaaatttacattaattgatcca
ttgcaattaggtctacttaaactttaa
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