KEGG   Bombus vancouverensis nearcticus: 117166784
Entry
117166784         CDS       T07628                                 
Name
(RefSeq) syntaxin-1A isoform X1
  KO
K04560  syntaxin 1A
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    117166784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bvan04131]
    117166784
Membrane trafficking [BR:bvan04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    117166784
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 PoNi_N Spectrin_Anc-1_2 ETRAMP Lzipper-MIP1 Vac_Fusion DUF6584 Spectrin_Anc-1 SHPRH_helical-2nd SBP_bac_4HB
Other DBs
NCBI-GeneID: 117166784
NCBI-ProteinID: XP_033206973
LinkDB
Position
Unknown
AA seq 293 aa
MTKDRLAALVAAQSDDDDVADDVSVNVGGPDDFMTEFFAEVEEIREMIDRIQTNVEDVKK
KHSAILSAPQTDEKVKMELEDLMSDIKKTANKVRAKLKVIEQNIEQEEHTNKSSADLRIR
KTQHSTLSRKFVEVMTEYNRTQTDYRERCKGRIQRQLEITGRTTTNEELEEMLEQGNPAV
FTQGIIMETQQAKQTLADIEARHADIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYH
VEHAVDYVQTATQDTKKALKYQSKARRKKIMIMICLAILAVVLTTTIGGYFGL
NT seq 882 nt   +upstreamnt  +downstreamnt
atgaccaaggatagattagcagccctcgttgcggcccagtcggacgacgatgacgtggcg
gacgatgtttccgtcaacgttggcgggccggatgattttatgaccgaatttttcgcggag
gtggaggagatccgcgaaatgatagacaggatccagacgaacgtagaggatgtgaagaaa
aaacatagtgccatcttatcggcaccacaaaccgacgaaaaggttaaaatggaattggaa
gacctgatgtccgatatcaagaaaacggccaataaagtcagagccaagttgaaggtgata
gaacaaaatatcgagcaagaagagcacacgaacaaatcttcggcggatttaaggatacgc
aagacacagcattcgacgctttcgaggaagttcgtcgaagtgatgacggagtacaatcga
acgcaaaccgattacagagaacggtgtaagggaaggatacaacgacagctggaaatcacc
ggtaggacgaccaccaacgaggaactggaggaaatgctggaacagggaaatccggcggtg
ttcacgcaggggattatcatggaaacgcaacaagcgaaacagacgctcgccgatatcgag
gcgcgtcatgccgacatcattaaactagaaaattcgatcagggaacttcacgatatgttc
atggacatggcgatgttggtagaaagtcagggcgagatgatagatcgcatagaataccac
gtggaacacgcggtggactacgtgcagacggctacgcaggacaccaaaaaagcgctcaag
tatcaaagcaaagctcgacggaagaagatcatgatcatgatctgccttgctatactcgcc
gtcgttctgactaccaccatcggtggatattttgggctgtaa

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