Bombus vancouverensis nearcticus: 117166800
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Entry
117166800 CDS
T07628
Name
(RefSeq) uncharacterized protein LOC117166800
KO
K27498
focadhesin
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117166800
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117166800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-GeneID:
117166800
NCBI-ProteinID:
XP_033206998
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MMDEIEYKLESTNPVLISHATSKLFESIKKKKCDRQTDHISKIPEFKLLLTKRDSTNVTL
SISACQALTALVENGLWDINEALATFISSISSIKNYMVATTTISHLLILDLKRDTGQENI
YPFTLHTPQHPFITILTQDKRSWQTILSQMTFILNHQDARIREKGMKMLRPVFLYVLCNP
SSDSMDYCMQQIWQLLIKSRHSTYVQTEVLLWMCTAEIHSCINTNYRILELAEKAASEGN
REYCTALLPMIVSLVIQLLQQGSDPTPNFHVILFIIDHCDSYIGNLVLTLMAEVITLCPA
IYLYTTLQICTMIAKKMSYNDVFFYTLIASILKWIAYPSVLCSEALDMARDLASEMFTRT
KLTCNNETIFSNKLFTVFTHSDPYIQFYTELVHCLSIWNQNDILSWLNNISCVPTYLKDK
CKLLISGLLLQSNEPQIVQLCCNILVDVSRERTNFGSHVLSLVLHKLTKCKSSIESKCLL
LVMPELMITKENVPIVNHTLNQLLNGDKQLKYFIIELYLKALKKEPRCYRFLFAAIIKVM
ESDLSWYSDATCARAMKHICENYPEHGEKLVPLILQILNRSTGMNGGTASALALGCISAL
YKASVIDIYSTWRVLSPRMEKEKRSVVLESLCELLADVAFYAPSSQCLEEHDHQLIDDIV
SKLWKYTTCSDVKVIKAALKALASYRLEQLSLKTLPVEFRYNLVLPATYAKIPTDTVKKP
EDVLPYIPGVCWIQMLQNINKMTLSAAGNLLISFVIEEVNSFRSGMYDWPQGEPQNFKYL
RDKSVIRAVGEYLRKTNKFDSNNHCIVTECLRIFAHKYPKPLPNVNWSFLKDTFHLSAEA
KQYTLSIACHHATVSSSAKSFIEDYLLTYKSVNDAEDFIWKDNEHPILYSNLEYLCQAVQ
PNIIKRFLETTLECAIKKMNENSIQSFHCIMYSYAQALRNPEICHANSTLLSTILEELLD
KIDLTCDRFYPYFTAALELPMEHLERTTSPKVWWETMASKLKNAIAIRAELSLKKSNSEA
SLKWLNEIIGETFASTSSVQTYFLEIIQKVQANMQFERSSSNWILELMTQVQGFLMDSSQ
NHNDKIQFYCTVLFTSVISLSGIDSMLMKRDLVIKSQNVRIKLFPQALTLLSDRENWKHA
IPQMMEWLNYMRTNHISNTYKYMFHRALISLRHNSYYKNVWSKYLSIKTDIDI
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaaatagaatataaattagaatcgacgaatcctgtattaatatcgcacgca
acgtcgaaactcttcgaatccattaagaaaaagaaatgcgatcgacaaacggaccatatt
tccaagatacccgagtttaagttgttattaacaaaacgtgatagtacaaatgtcacactc
agcatatccgcctgtcaagccctaactgctctggttgaaaatggattatgggacattaac
gaggctttagctactttcatctcgagtatctcttctataaaaaattatatggttgctact
acaaccataagccatttactaatattagatttaaaacgcgatacaggacaagaaaatata
tatccgtttacattacatacgccacaacacccttttataaccattttaactcaagataaa
cgtagctggcaaactatattaagtcagatgacatttattctgaatcatcaggatgctcga
attagagaaaagggcatgaaaatgttacgaccggtatttttgtatgttttatgcaatcct
tcatcagattcgatggattactgtatgcaacaaatttggcaattgttaattaaatcgaga
cacagtacttatgtgcagacagaagttttactttggatgtgcacagcggaaattcattct
tgtataaatacaaactatagaatcttagagcttgcagaaaaagctgcatcagaaggaaac
agagaatattgtacagctttgttgccgatgattgtgtccttagttatacaattactacag
caaggttctgatccaacaccaaattttcatgttatattgtttatcatagaccactgtgat
agctatattgggaatcttgtgctaacattaatggcagaagtaattactttatgtccagct
atttatttgtatactactttacaaatatgtacgatgatagcaaagaaaatgtcttacaat
gatgtatttttctacactttgatagcatctattttaaaatggattgcatatccatccgta
ttgtgttctgaggcactggacatggcgagagatttagccagcgagatgtttacaagaacg
aaattaacgtgcaacaatgaaacgatattctcaaataaactttttacagtgtttactcat
tccgacccatacattcaattctacacggagctagtgcattgcttgagtatctggaaccaa
aatgatattctatcatggttgaacaacatatcatgcgtaccaacttacttaaaagacaaa
tgtaaactattgatatctggtctccttctacagtcaaacgagccacaaatagttcaactg
tgttgtaatatactcgttgatgttagcagagaaaggacaaattttggatcgcacgtgctc
tcattggtattgcataaattaaccaaatgtaaaagcagtatagaatcaaaatgtttgtta
ctggtaatgcctgagcttatgattacgaaagaaaatgtcccaatcgttaatcataccttg
aaccagttgttaaacggtgacaagcaactgaaatattttataatcgaattatatttgaaa
gcattgaaaaaagaaccgagatgttacagatttctttttgctgcaataatcaaagtaatg
gaaagcgatctttcctggtattcggatgcaacttgtgcaagagctatgaaacatatttgt
gaaaattatcctgaacatggggaaaaattggtaccattgatattgcagatattaaatcgt
tcgacgggtatgaacggcggaaccgcaagtgcgctcgcgcttggatgtatttctgctctt
tacaaagcatccgtaatagacatttattcaacatggagagtactatctccaagaatggaa
aaagagaagcggtctgttgttttagaaagcttgtgcgaactacttgctgatgttgcattc
tatgcaccttcttctcaatgcctcgaagaacacgaccatcaattgatcgacgatatcgta
tcgaagttgtggaaatacacgacatgtagtgatgtaaaggtaatcaaagctgcgcttaaa
gctctagcttcgtaccgtctcgaacaattatccttgaaaacattaccagtagaatttaga
tataatctcgtactaccagctacgtatgcgaaaattccaaccgacacggtaaaaaagcca
gaggacgtgcttccgtatatacctggtgtttgttggatccaaatgcttcaaaatataaat
aaaatgaccttgtcagcagccgggaaccttctaatttccttcgtgatagaagaagtaaat
agtttccgatccggcatgtacgactggcctcaaggggagccgcaaaattttaaatattta
cgagacaaaagcgtaatcagagcggtcggtgaatatttgaggaaaactaataagtttgat
tcgaataatcattgtatcgttacggaatgcctacgaatattcgctcataaatatccgaaa
ccattacccaatgtaaattggagttttttgaaggatacttttcacctatcagccgaagca
aagcaatatactctttctatcgcgtgtcatcatgcgacggtatcttcatctgctaaatct
tttatagaagattatctattgacgtataaatctgtaaacgatgcagaagatttcatttgg
aaagacaatgaacacccgatattgtattcaaatctcgagtacttgtgtcaagctgtacaa
ccaaatatcattaaacggttcttagaaactactttagaatgtgcaattaaaaaaatgaac
gaaaattcgatacaatcgtttcattgcatcatgtattcatatgctcaggcattaagaaat
ccagaaatatgccatgctaactctacactgctttctaccatactggaagaacttttggac
aaaatagatttaacgtgcgaccgtttctacccttatttcacggcagctttggaattacca
atggagcatttagaaagaactacatctcctaaagtgtggtgggaaacaatggccagtaaa
ttaaagaatgcgatcgcaattagagccgaattgtctttaaaaaagtctaattccgaagcc
tccttaaagtggttgaacgagatcatcggtgaaactttcgcttctacgtcaagtgtgcaa
acatattttctcgaaattatacaaaaagtacaagccaatatgcaattcgaaagatccagt
tcaaattggattctggaacttatgacacaggttcaaggatttttaatggactcatcacaa
aatcataatgacaaaatacaattctattgtactgttttatttacctctgtgataagcttg
tctggcatagactccatgttaatgaaacgagatctagtgattaaatcgcaaaatgtcaga
ataaaattatttcctcaagctctaacacttctttccgatagagagaattggaaacatgca
attccacagatgatggaatggttaaattatatgagaacaaatcatatttctaatacatat
aaatacatgtttcatcgggcattaatttctttaagacataattcatattataaaaatgta
tggagtaaatatttatcgattaagacggacatcgatatttaa
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