Brevundimonas vesicularis: CEP68_01130
Help
Entry
CEP68_01130 CDS
T04934
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bvc
Brevundimonas vesicularis
Pathway
bvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEP68_01130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvc03019
]
CEP68_01130
03009 Ribosome biogenesis [BR:
bvc03009
]
CEP68_01130
Enzymes [BR:
bvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CEP68_01130
Messenger RNA biogenesis [BR:
bvc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CEP68_01130
Ribosome biogenesis [BR:
bvc03009
]
Prokaryotic type
rRNA processing factors
CEP68_01130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
DUF5351
Motif
Other DBs
NCBI-ProteinID:
ASE38220
UniProt:
A0A1Z3U4X7
LinkDB
All DBs
Position
226050..228752
Genome browser
AA seq
900 aa
AA seq
DB search
MLIDAAHPEETRVAIVDGRKIEEFDFESRAKRQLRGNIYLAKVTRVEPSLQAAFIEYGGN
RHGFLAFNEIHPDYYQIPVADREAIMAEAHDDEDEDDLDRESTGDDIDPESALADEERLK
RRLMRRYKIQDVIKRRQILLVQVVKDERGAKGAALTTWLSLAGRYCVLMPNTGKGGGISR
KITNTSDRRRLKSAVSALEVPKGMGLIIRTAGAKRTKAEIKRDYQYLLRLWETIRETTLA
SHAPSVIYEEENLVRRAVRDMFDKDFDGIQVEGVEGFKEARDFMRVLMPAQAKKVHLYRG
SRPLFAANGIEELLTQIHQPVVPLKSGGYLVINQTEALVAIDVNSGRATKERNVEQTAFK
TNMEAAEEAARQLRLRDLAGLVVIDFIDMDEGKNNRAVERVLKEALSSDRARIQMGRISP
FGLMEISRQRRRLGVIEGATEACPHCQGTGRIRSAESAALMTLRAVDIEAGKNGAGVVVL
KVCTAVGLYILNHKRAYLQSLLERRGLNVIVQIDDSLGQGEHNIERTETNEDFVAPEIEM
PNLDDDFDASLYEDEDEEDDEEIIADDDDDTVESLDREDSDDDEPRERSERHEGGRDRGR
GRNRRRRGGRRDEETSDVEAVDTVSADDASDDEEDENGRRRRRGRRGGRRVREDGERDVY
TWVRGRTPSLDDPYVWFDPLNPGRSEGRPERGERPERAERPAVAQSEIEGLDVVANNGAG
EGSGDEGGRSRRRRRRGRGRGDGPVSHEIKVENRATNEGMPPDGSPETPMAVMVEPTEAV
ETSAPAIAPEPQRRRVRRKSASANVEIATEPHPDTAIEPNEATVQGAPVELDVTPHEALA
AEPAEVAPVAAPTAVPVTEAVLAEPFVAPTPEIDVQAIIAEDPNQIVAPPEKPKRGWWRR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgatgcggcgcatcccgaggagacccgggtcgccatcgtggacgggcgcaag
attgaggaattcgatttcgaatcccgtgcgaagcgccagcttcgcggcaacatctacctc
gccaaggtcacccgcgtagagcccagcctgcaggccgccttcattgaatacggcggcaat
cgccacggcttcctcgccttcaacgaaatccaccccgactactaccagatccccgtcgcc
gaccgcgaagccatcatggccgaggcgcacgatgatgaggacgaggacgatctcgaccgc
gaatcgaccggcgacgacatcgatcccgaatcggcgctggccgacgaagagcggctgaag
cgccgccttatgcgtcgctacaagattcaggacgtcatcaagcgccgccagatcctgctg
gtccaggtcgtcaaggacgagcgcggcgccaagggcgcagccctgaccacctggctgtcg
ctggccggccgctactgcgtgctgatgcccaacaccggcaagggcggcggcatttcgcgc
aagatcacgaacacctctgaccgtcgtcgcctgaagagcgccgtctcggccctggaagtg
cccaagggcatgggcctgatcatccgcacggcgggcgccaagcgcaccaaggccgagatc
aagcgcgactatcaatatctgctgcgcctgtgggaaacgatccgcgagaccaccctcgcc
tctcacgccccctcggtgatctacgaggaagagaacctggtccgccgcgccgtgcgcgac
atgttcgacaaggatttcgacggcatccaggtcgagggcgtcgagggcttcaaggaagcg
cgcgacttcatgcgcgtgctgatgccggcgcaggccaagaaggttcacctgtatcgcggc
tcgcggcccctgttcgcggccaacggcatcgaggaactgctgacgcagatccatcagccg
gtcgtgccgctgaagtccggcggctatctggtgatcaaccagaccgaggccctggtggcc
attgacgtcaactcgggccgcgccaccaaggaacgcaacgtcgaacagacggcgttcaag
accaatatggaagcggccgaggaagccgcccgccaactgcgcctgcgcgacctcgccggc
ctggtcgtcatcgacttcatcgacatggatgagggcaagaacaaccgcgccgtcgagcgc
gtgctgaaggaggccctgtcctccgaccgcgcccgcatccagatgggccgcatctcgccc
ttcggcctgatggaaatcagccggcagcgtcgccgcctgggcgtgatcgagggtgcgacc
gaagcctgcccgcactgccagggcacgggccgcatccgctcggccgaatccgccgccctg
atgaccctgcgcgcggtcgacatcgaggccggcaagaacggcgcgggcgtcgtggtgctg
aaggtctgcaccgccgtcggcctgtacatcctgaaccacaagcgcgcctatctgcagtcg
ctgcttgaacgtcgcggcctgaacgtcatcgtccagatcgacgacagcctgggtcagggc
gaacacaatatcgagcgcaccgagaccaatgaggacttcgtcgcgcccgagatcgagatg
cccaatctcgacgacgacttcgacgcctcgctgtacgaagacgaggatgaggaggacgac
gaggagatcatcgccgacgacgatgacgacaccgtcgaatccctggaccgcgaagacagc
gacgacgacgaaccgcgcgaacgttcggaacgtcatgaaggcggtcgcgatcgcggtcgt
gggcgcaaccgtcgccgtcgcggcggtcgtcgcgacgaggaaacctccgacgtcgaggcc
gtcgatacggtcagcgccgacgacgcctcggacgatgaggaagacgaaaacggccgccgc
cgtcgccgtggccgccgtggcggtcgccgcgtccgcgaggatggcgagcgcgacgtctac
acctgggtccgcggccgcacgccgtcgctggacgacccctatgtctggttcgacccgctg
aaccccggccgttcggaaggtcgtccggaacgcggcgagcgcccggagcgggctgaacgt
cccgctgtcgctcagtccgagatcgaaggcctggatgtcgtcgccaataacggggctggc
gaaggctccggcgacgaaggcggccgttcgcgccgtcgtcgccgtcgcggtcgcggtcgt
ggcgacggtcccgtcagccacgagatcaaggtcgaaaaccgcgccactaacgaaggcatg
ccgcccgacggctcgcccgagaccccgatggccgtcatggtcgagccgaccgaggccgtc
gaaacgtctgccccggccatcgcgcccgagcctcagcgtcgccgcgtgcgccgcaagtcg
gccagcgccaacgtcgagatcgcgaccgaaccgcatcccgacaccgccatcgagccgaac
gaggccacggtccaaggcgcgccggtggagctggacgtgaccccgcatgaggcgctggcc
gccgaaccggccgaggtcgccccggtcgccgcgccgacggcggttccagtgaccgaggcc
gtcctggccgagcccttcgtcgcccccacgccggagatcgacgttcaggccatcatcgcc
gaagacccgaaccagatcgtcgcaccgcccgaaaagcccaagcgcgggtggtggcgccgc
tga
DBGET
integrated database retrieval system
