Brevundimonas vesicularis: CEP68_01180
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Entry
CEP68_01180 CDS
T04934
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bvc
Brevundimonas vesicularis
Pathway
bvc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEP68_01180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvc03021
]
CEP68_01180
03400 DNA repair and recombination proteins [BR:
bvc03400
]
CEP68_01180
Enzymes [BR:
bvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEP68_01180
Transcription machinery [BR:
bvc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEP68_01180
DNA repair and recombination proteins [BR:
bvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEP68_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HEPN-like_int
DUF4249
Motif
Other DBs
NCBI-ProteinID:
ASE38229
UniProt:
A0A1Z3U4M0
LinkDB
All DBs
Position
complement(238074..239093)
Genome browser
AA seq
339 aa
AA seq
DB search
MIERNWQELIRPEKPQIEIGSDAQRKARLVAEPLERGFGVTLGNALRRVLLSSLQGAAVT
AIQIDGVVHEFSSLEGVREDVVDIVLNIKQLALRMHAEGPKRMTLRATGPGPVTAGQIDV
PADIEVLNSDHVICTLDDGASVRMELTVQNGKGYVAAELNRPEDAPIGLIAVDALYSPVK
KVAYRVEPTRQGQSLDYDKLLLEVETNGAVTPVDAVAYAARILQDQLQIFITFEEPKKAV
EQSDGKPDLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEGEMLRTPNFGRK
SLNEIKEVLTTMGLSLGMDVPNWPPENIEDLAKKFDDQI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaagaaactggcaagagctgatccgtcccgagaagccgcagatcgagatcggt
tccgacgcccagcgcaaggcgcgcctggtggccgaacccctcgagcgtggcttcggcgtg
acgctcggcaacgcgctccgtcgcgttctgctgtcctcgctgcaaggcgcagccgtcacg
gccatccagatcgacggcgtcgttcatgaattctcgtcgctggaaggcgtgcgcgaagac
gtggtcgacatcgtcctgaacatcaagcaactggcgctgcgtatgcatgccgaaggcccc
aagcgcatgaccctgcgcgccacgggccccggtccggtgacggccggccagatcgacgtg
ccggcggacatcgaggttctgaactccgaccacgtcatctgcacgctggacgacggtgca
tcggtgcgcatggaactgaccgtccagaacggcaagggctatgtcgccgccgagttgaac
cgtccggaagatgcgccgatcggcctgatcgccgtcgacgccctgtattcgccggtcaag
aaggtggcttaccgcgtcgagccgacccgtcagggtcagtcgctggactacgacaagctg
ctgctggaagtcgaaaccaacggtgcggtcacgccggttgacgccgtggcctacgccgcg
cgcatcctgcaggatcagctccagatcttcatcaccttcgaagagcccaagaaggctgtc
gagcagtcggacggcaagccggacctgcccttcaacccggcgctgctgaagaaggtggac
gagctggaactgtcggttcgttcggccaactgcttgaagaatgacaacatcgtctacatc
ggcgacctgatccagaagaccgagggcgaaatgcttcgcaccccgaacttcggccgcaag
tcgttgaacgagatcaaggaagttctcacgacgatgggcctcagcctcggcatggacgtg
ccgaactggccgcccgaaaacatcgaagatctggccaagaagttcgacgaccagatctaa
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