Brevundimonas vesicularis: CEP68_08470
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Entry
CEP68_08470 CDS
T04934
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bvc
Brevundimonas vesicularis
Pathway
bvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEP68_08470 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvc03021
]
CEP68_08470 (rho)
03019 Messenger RNA biogenesis [BR:
bvc03019
]
CEP68_08470 (rho)
Transcription machinery [BR:
bvc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CEP68_08470 (rho)
Messenger RNA biogenesis [BR:
bvc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEP68_08470 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
ATPase_2
OB_RNB
NACHT
S1CSD-TOTE-2
AAA
AAA_14
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ASE39535
UniProt:
A0A1Z3U8F0
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All DBs
Position
1654438..1655871
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AA seq
477 aa
AA seq
DB search
MTDVRDTNTDTPENEGVEVETPTHHGAAHEAGEAAGADSGVDTTADDEEDGEPVVANGRI
TLAELNEKTPADLVAFAEQLEVENASNLRKQDLLFAILKALADEEVEIIADGVLEILPDG
FGFLRSSDANYLPGPDDVYVSPSQIRRFGLRSGDTVHGAVRAPREGERYFALLKVDTINL
EDPEAVKTKVLFDNLTPLYPEERLHMEIQDPTLKDRSGRVIDIVAPLGKGQRCLIVAPPR
VGKTVMLQNIAKSIERNHPEVFLIVLLIDERPEEVTDMQRTVKGEVVASTFDEPATRHVA
VAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNATVPSSGKVLTGGVDANALQRPKRFF
GAARNVEQGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAIDVL
KSGTRKEDLITPKDQLAKTYVLRRILNPMGPQDAIEFLLDKLRQSKNNSDFFQSMNT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtccgcgacaccaacaccgacacccccgaaaacgaaggcgtggaggttgaa
acccccacccatcacggcgcggcgcatgaagccggcgaggcggcgggcgccgattccggc
gtggacacgacggcggatgacgaagaggacggcgagcctgtcgtcgccaacggccgcatc
acgctggccgaactgaacgagaagaccccagccgatctggtcgccttcgccgaacaactg
gaggttgagaacgcctcgaacctgcgcaaacaggatctgctgttcgccattctgaaggcc
ttggccgacgaagaagtcgagatcatcgccgacggcgtgctggaaattctgccggacggg
ttcggcttcctgcgcagctcggacgccaactatctgccggggccggacgacgtctatgtc
tcgccgtcgcagatccgccgcttcggcctgcgctcgggcgacaccgtccatggggccgtg
cgggccccgcgggaaggcgaacgctacttcgccttgctcaaggtcgacacgatcaatctg
gaagaccccgaagcggtcaagaccaaggtcctgttcgacaacctgacgccgctctatccc
gaagagcggctgcacatggaaatccaggatccgacgctgaaggatcgctcgggccgggtg
atcgatatcgtcgcgcctctgggcaagggccaacgctgcctgatcgtggcgccgccgcgc
gtcggtaagacagtgatgctgcagaacatcgccaaatcgattgaacgcaaccacccggaa
gtcttcctgatcgtcctgctcatcgacgaacgccccgaagaagtgacggacatgcagcgc
accgtgaagggcgaggtcgtcgcctccaccttcgacgagcccgccacccgccacgtcgct
gtcgccgaaatggtgatcgaaaaggccaagcgtctggtcgagcacaagaaggacgtggtg
atcctgctggactccattacgcgtctgggccgcgcctacaacgccactgttccctcgtcg
ggtaaggtgctgacgggcggtgtggacgccaacgccctgcaacggccgaagcgcttcttc
ggcgccgcgcgcaatgtagagcagggcggttcgctgaccatcatcgccacggccctgatc
gacaccggtagccggatggacgaggtgatcttcgaagagttcaagggcaccggcaactcg
gaaatcgtgctggatcgcaaggtcgccgacaagcgcatcttccccgccatcgacgtgctg
aaatccggcacccgcaaggaagacctgatcacgccgaaggatcagctggccaagacctac
gtcctgcgccgcatcctgaatccgatggggccgcaggacgcgatcgagttcctgctcgac
aaactgcgtcagtcgaagaacaactcggacttcttccagtcgatgaacacctga
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