Brevundimonas vesicularis: CEP68_15005
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Entry
CEP68_15005 CDS
T04934
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bvc
Brevundimonas vesicularis
Pathway
bvc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEP68_15005 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvc03021
]
CEP68_15005 (rpoC)
03400 DNA repair and recombination proteins [BR:
bvc03400
]
CEP68_15005 (rpoC)
Enzymes [BR:
bvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEP68_15005 (rpoC)
Transcription machinery [BR:
bvc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEP68_15005 (rpoC)
DNA repair and recombination proteins [BR:
bvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEP68_15005 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ASE40686
UniProt:
A0A1Z3UBL8
LinkDB
All DBs
Position
2961201..2965397
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVLNIFNPVPVTPTFDQIKIALASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIDLAAPVAHIWFLKS
LPSRISLMLDMALKDVERVLYFENYIVTEPGLTPLKQNQLLTEDEFYRYQEEFGDDGFTA
EIGAEAVRNLLMGIDLNAEAEKHRAELADNPSEMKAKKASKRLKLIEAFLESGNKPEWMI
LTIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVITVG
PELKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPAVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPKLIEGKAIRLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLVKDGEPGEGKLFANIGEIDAALD
AKVVTLHTRIKARWTEQDAEGNEVTKVIDTTPGRMKLAALLPRNPNVGYRLLEKNLTKKE
IGNLIDVVYRHCGQKATVIFADQMMGLGFREAAKAGISFGKDDIVIPAKKVELVAETRTQ
VEEYEQQYADGLITRGEKYNKVVDAWSKATDRIADAMMGEIAQPRVLIEGENPDINSVFM
MANSGARGSQAQMKQLGGMRGLMAKPSGEIIETPITSNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDSIVTEQDCGSTRGITLRAVMEGGDVLVSLGQRILGRYA
AEDIKEPGTDTVLFPADTYLVEEVAEAVEAAGVQSVKVRSALTCEAEAGICAHCYGRDLA
RGTNVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAETSFMEATNAGTAKVTGPTV
VAAHGDLVAMSRNVIVTVVVDGKDRETHKAPYGARIRVKDGDEVKKNQRLAEWDPYTTPI
LTEVGGVVRFEDLVEGLSVKEETDEATGIAQRVVSDWRASPRGSDLRPAMGVTLGDAYAK
LSSGSDARYLLPVGAVLSVSNGDEVKPGEIIARVPTEGAKTRDITGGLPRVAELFEARRP
KDCAVIAEMDGRVEFGRDYKNKRRIKITPEPNADGVQGEPVEFLIPKGKHISVHDGDLIQ
KGDYIIDGNPDPHDLLRIQGVEALAEYLVNEVQEVYRLQGVPINDKHIEVIVRQMLQKVE
VLDSGETTLIRGDTVEVAEAVLENAKVEKRGGRLATTQPVLLGITKASLQTRSFISAASF
QETTRVLTDASVHGKKDMLEGLKENVIVGRLIPAGTGAYLRSLQKIANERDAELTSALEE
AIEPLPADLQLELESSES
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagtcctgaacatcttcaacccggtcccggtcaccccgaccttcgaccag
atcaagatcgccctggcctcgcccgagaagatccgttcgtggtcgttcggcgagatcaag
aagccggaaaccatcaactaccgcacgttcaagcccgaacgtgacggcctgttctgcgcg
cgtatctttggcccgaccaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcattatctgcgagaagtgcggcgtcgaagtcaccctggcccgcgttcgccgc
gagcgcatgggtcacatcgacctggctgcgccggtcgcccacatctggttcctgaagtcg
ctgcccagccgcatctcgctgatgctggacatggcgctgaaggacgtcgagcgcgtcctg
tacttcgagaactacatcgtcaccgagccgggcctgaccccgctgaagcagaaccaactg
ctgacggaagatgagttctatcgctaccaagaagagttcggcgatgacggcttcaccgcc
gagatcggcgccgaggccgtccgcaacctgctgatgggcatcgacctgaacgcggaagct
gaaaagcaccgcgccgagctggccgacaacccctcggaaatgaaggccaagaaggcgtcc
aagcgcctgaagctgatcgaggccttcctggaatcgggcaacaagcccgagtggatgatc
ctgacgatcgtgccggtcatcccgccggaactgcgtccgctggtgccgctggacggcggt
cgtttcgcgacctccgacctgaacgacctgtatcgccgcgtcatcaaccgcaacaaccgc
ctgaagcgcctgatggaactgcgcgcgccggacatcatcatccgtaacgaaaagcggatg
ctgcaggagtccgtcgacgccctgttcgacaacggccgtcgcggccgcgtgatcacgggc
gccaacaagcgtccgctgaagtcgctggccgacatgctgaagggcaagcagggtcgcttc
cgtcaaaacctgctgggcaagcgcgtcgactattcgggccgttcggtcatcaccgtgggt
ccggaactgaagctgcacgagtgcggcctgcccaagaagatggcgctggagctgttcaag
ccgttcatctatgcgcgcctggacgccaagggcctgtcgggcaccgtcaagcaatccaag
cgcatggtcgagcgcgagcagcccgccgtctgggacatcctggacgaggtcatccgcgag
cacccggttctgctgaaccgcgcgccgacgcttcaccgcctgggcatccaggcgttcgag
cccaagctgatcgagggcaaggccatccgcctgcacccgctggtctgcaccgccttcaac
gccgacttcgacggcgaccagatggccgttcacgtcccgctgagcctcgaggcccagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgtcgcccgccaacggcaagccg
atcatcgtgccgtcgcaggacatcgtcctgggcctgtactatctgtcgctggtcaaggac
ggcgagccgggtgaaggcaagctgttcgccaacatcggcgagatcgacgcggcgctggac
gccaaggtcgtcaccctgcacacgcgcatcaaggcgcgctggacggaacaggacgccgaa
ggcaatgaggtgaccaaggtcatcgacaccacgccgggccgaatgaagctggcggctctg
ctgccgcgcaacccgaacgtcggctaccgcctgctcgagaagaacctgaccaagaaggaa
atcggcaatctgatcgacgtggtctatcgccactgcggtcagaaggcgacggtcatcttc
gctgaccagatgatgggcctgggcttccgcgaagccgccaaggccggcatttcgttcggc
aaggacgacatcgtgatcccggccaagaaggtcgagctggtcgccgagacccgcacccag
gtcgaggagtacgagcaacagtacgccgacggcctgatcacgcgcggcgagaagtacaac
aaggtggtcgacgcctggtccaaggccacggaccggatcgccgacgccatgatgggcgag
atcgcgcaaccgcgcgtgctgatcgagggtgaaaaccccgacatcaactcggtcttcatg
atggccaactccggcgcccggggttcgcaggcccagatgaagcaactgggcggcatgcgc
ggcctgatggccaagccgtccggcgagatcatcgagacgccgatcacctcgaacttcaag
gaaggcctgaccgtccttgaatactttaactccacccatggcgcccgtaagggtctggcc
gacaccgcgctgaagaccgccaactcgggttacctgacccgccgtctggtggacgtggcg
caggactccatcgtcaccgagcaggattgcggctcgacgcgcggcatcaccctgcgtgcg
gtgatggaaggcggcgacgtgctggtctcgctgggtcagcgcatcctgggtcgctatgcg
gccgaggacatcaaggagccgggcacggataccgtcctgttccctgccgacacctatctg
gtggaagaagtcgccgaggccgtcgaggctgcgggcgtccagtcggtcaaggtccgttcg
gccctgacctgcgaggccgaagccggcatctgcgcccactgctacggccgtgacttggcg
cgcggcaccaacgtcaacatcggcgaagcggtcggcgtcatcgccgcccagtcgatcggc
gagccgggcacccagctgacgatgcggaccttccacatcggcggtacggctcaggtggcg
gaaacctccttcatggaggcgaccaacgccggtacggccaaggtcaccggcccgaccgtc
gtcgcggctcacggcgatctggtggccatgagccgcaacgtcatcgtgaccgtggtcgtc
gacggcaaggaccgcgagacgcacaaggctccttacggcgcccgcatccgcgtcaaggac
ggcgacgaggtcaagaagaaccaacgcctggcggagtgggacccctacaccaccccgatc
ctgacggaagtcggcggcgtcgtgcgcttcgaagacctggtcgaaggcctgtcagtcaag
gaagaaaccgacgaagcgacgggcatcgcccagcgcgtcgttagcgactggcgcgccagc
ccgcgcggttcggacctgcgtccggccatgggcgtcaccctgggcgacgcctacgccaag
ctgtcgtccggttcggacgcccgctatctgctgcccgtgggcgcggttctgtccgtgtcg
aacggcgatgaggtcaagccgggcgagatcatcgctcgcgttccgaccgaaggcgccaag
acccgcgacatcaccggcggtctgccgcgcgtcgccgaactgttcgaagctcgccgtccg
aaggactgcgcggtcatcgccgagatggatggtcgcgtcgaattcggccgcgactacaag
aacaagcgtcgcatcaagatcacgccggagcccaacgccgacggcgtgcagggcgaaccg
gtcgagttcctgatcccgaaaggaaagcacatctccgtccacgacggcgatctgatccag
aagggcgactacatcatcgacggcaacccggatccgcacgatctgctgcgcatccagggc
gtcgaggcgctggccgagtatctggtgaacgaagtgcaggaggtctatcgactgcagggc
gtgccgatcaacgacaagcacatcgaggtcatcgtgcgtcagatgctgcagaaggtggaa
gtgctggattcgggtgaaaccaccttgatccgcggcgacaccgtcgaagtcgccgaagcc
gttctggaaaacgccaaggtcgagaagcgtggcggccgtctggccaccacccagcccgtc
ctgctgggcatcaccaaggcgtcgctgcaaacccgcagcttcatctcggcggcgtccttc
caggagaccactcgcgtcctcaccgacgcctcggtccacggcaagaaggacatgctggaa
ggcctgaaggaaaacgtcatcgtcggccgcctgatcccggccggcaccggcgcctacctg
cgcagcctgcagaagatcgccaacgagcgtgatgcagaactgacctcggccctggaagag
gcgatcgagccgctgccggccgatctgcaactggagctggagagcagcgagagctga
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integrated database retrieval system
