Burkholderia vietnamiensis LMG 10929: AK36_1628
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Entry
AK36_1628 CDS
T03893
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bve
Burkholderia vietnamiensis LMG 10929
Pathway
bve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AK36_1628 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bve03019
]
AK36_1628 (pnp)
03016 Transfer RNA biogenesis [BR:
bve03016
]
AK36_1628 (pnp)
Enzymes [BR:
bve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AK36_1628 (pnp)
Messenger RNA biogenesis [BR:
bve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AK36_1628 (pnp)
Transfer RNA biogenesis [BR:
bve03016
]
Prokaryotic type
tRNA degradation factors
AK36_1628 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AJY06906
LinkDB
All DBs
Position
I:1759785..1761932
Genome browser
AA seq
715 aa
AA seq
DB search
MSMFNKVVKEFQWGQHKVRLETGEVARQASGAVIVDVEDTVVLATVVGAKSAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPDIPADIPALIGASAALAVSGLPFNGPVGAARVAYIDNAYVLNPTRDQIKASSLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQIAIDAIHELVREGGKPEWDWQPAPK
NEALIARVTELAHGDLLAAYQLRDKQARSTKLKEVYAATSAKLEEDALAAGTVAADKATV
GNILFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVK
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEHGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSSEGMAEAKKRIENITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAASQSDTPPQQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaaggtcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggtgaagtcgcccgtcaggcgagcggtgccgtcatcgtcgacgtggaagacacc
gtcgtgctggcgaccgtcgtcggcgccaagtcggcgaagccgggccaggatttcttcccg
ctgaccgtcgactacctcgaaaagacctactcggccggcaagatccccggcggcttcttc
cgtcgcgaaggccgtccgtcggagcatgagacgctgacgtcgcgcctgatcgatcgtccg
ctgcgcccgctgttcccggaaggcttctacaacgaagtgcaggtcgtgatccacgtgctg
tccgtgaacccggacatcccggccgacattcccgcgctgatcggcgcgtcggccgcgctg
gccgtgtcgggcctgccgttcaacggcccggtcggtgccgcgcgcgtcgcgtacatcgac
aacgcctacgtgctgaacccgacgcgtgaccagatcaaggcgtcgagcctcgatctcgtc
gtcgccggtacggagcgcgcggtgctgatggtcgaatcggaagccgaccagctgccggaa
gacgtgatgctgggcgcggtcgtgttcggccacgaacagatgcagatcgcgatcgacgcg
atccacgagctcgtgcgcgaaggcggcaagccggagtgggactggcagccggccccgaag
aacgaagcgctgatcgcgcgcgtgacggaactggcgcacggcgatctgctcgccgcttac
cagctgcgcgacaagcaggcgcgctcgacgaagctgaaggaagtctacgcggcgacctcg
gcgaagctcgaagaagacgcgctggcggccggcacggtcgcggccgacaaggccaccgtc
ggcaacatcctgttcgacatcgaagcgaagatcgtccgctcgcagatcctgaacggcgag
ccgcgcatcgacggtcgcgacacgcgcaccgtgcgtccgatcgagatccgcaccggcgtg
ctgccgcgcacccacggttcggcgctgttcacgcgtggcgagacgcaggcgctcgtcgtc
gcgacgctcggcacgaagggcgacgagcagatcatcgacgcgctcgaaggcgaataccgc
gagcgcttcatgctccactacaacatgccgccgttcgcgacgggcgaaacgggccgcgtc
ggctcgccgaagcgtcgtgaaatcggccacggccgtctcgcgaagcgcgcgctggtcaag
tgcctgccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcaccgaa
tcgaacggttcgtcgtcgatggcgtcggtgtgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgccggtatcgcgatgggcctgatcctcgagggcaac
aagttcgcggtgttgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggccggcaccgagcacggcgtgaccgcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggtcgcatgcacatc
ctcggcaagatgacgtcggcagtgtcgggtgcgaacacgcaactgtccgagttcgcgccg
cgcatgatcacgatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgatccgcgcgctgaccgaagaaaccggcacgacgatcgacatttcggacgacggc
gtcgtgacgatcgcgagcacgagcagcgaaggcatggccgaagcgaagaagcgcatcgag
aacatcacggccgagatcgaagtcggccaggtgtacgaaggcacggtgctcaagctgctc
gatttcggcgcgatcgtgaacctgctgccgggcaaggatggcctgctgcacatctcggaa
atcgtcaacgagcgcgtgaaggacatcaacgactacctgaaggaaggtcagcaggttaag
gtcaaggtgatccagacggatgagaagggtcgcgtgcgcctgtcggcgaaggcgctgctg
aacgaagcggctgccgcgtcgcagtcggacacgccgccgcagcagtaa
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