KEGG   Burkholderia vietnamiensis LMG 10929: AK36_2097
Entry
AK36_2097         CDS       T03893                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
bve  Burkholderia vietnamiensis LMG 10929
Brite
KEGG Orthology (KO) [BR:bve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bve03021]
    AK36_2097 (rpoS)
Transcription machinery [BR:bve03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AK36_2097 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 HTH_20 HTH_Crp_2
Other DBs
NCBI-ProteinID: AJY07672
LinkDB
Position
I:2266833..2267918
AA seq 361 aa
MPKSKRHEPQAESEKISRATQASVKRAGASTDDEEDVAETETGLDTREAEADGDDEREGR
AEAAPDVDDFRALLQAELTADTIQHYLNRISVKPLLTVEEEQRYSRLAKAGEFDARQVMI
ERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSIE
RAIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMSTGDAAERREASIDDIAYLTGKTAE
EVTDILALNEHTASLDAPLDLDPASSLLDLLPDDQSQSPDAEVQHRELETLTRAWLSRLS
DKHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDAV
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgccgaaatcgaagcgccacgagccgcaagccgagtctgagaagatcagtcgtgccacg
caagcatcggtgaagcgagctggcgcttcgacggacgacgaagaagacgtcgcggaaacc
gaaaccggtctcgacacgcgcgaggccgaagccgacggcgacgacgaacgcgaaggccgc
gcggaagccgcccccgacgtcgacgatttccgcgcattgctgcaggccgagctcacggcc
gacacgatccagcactacctgaaccgtatcagcgtcaagccgctgctgaccgtcgaggag
gagcagcgctattcgcgtctcgcgaaagcgggcgaattcgacgcgcggcaggtgatgatc
gagcgcaacctgcgtctcgtcgtcagcatcgcaaagggctatctgaaccgcggcgtgccg
ctgctcgacctgatcgaggagggcaatctcggtctgatgcacgcgatcgagaaattcgac
ccgacgcgcggctttcgcttctcgacctacgcgacatggtggattcgccagagcatcgag
cgagcgatcatgaatcaggcgcgtaccgtgcgcctgcctgtgcacgtgatccgcgagctg
aaccaggtgctgcgcgcgaagcgccacctcgaaaagaactcgatgtcgacgggcgacgcg
gccgaacgccgcgaagccagcatcgacgacatcgcctacctcaccggcaagaccgccgag
gaagtcaccgacattctcgcgctgaacgagcacaccgcgtcgctcgacgcgccgctcgat
ctcgatcccgcgagcagcctgctcgatctgctgccggacgaccagagccagtcgcccgac
gccgaagtgcagcaccgcgagctcgagacgctcacgcgcgcgtggctgtcgcggctgtcc
gacaagcaccggcacgtgatcgaacgccgcttcgggctgaatcacatcgaaccggccacg
ctcgaggagctggccgacgagatggggctcacgcgcgagcgcgtgcggcagatccagcag
gaagcgctggtgcgcctgaagcggttctttgcctccaacggcgtgcgcaaggacgccgtt
ctgtaa

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