Burkholderia vietnamiensis LMG 10929: AK36_219
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Entry
AK36_219 CDS
T03893
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bve
Burkholderia vietnamiensis LMG 10929
Brite
KEGG Orthology (KO) [BR:
bve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bve03016
]
AK36_219
Enzymes [BR:
bve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AK36_219
Transfer RNA biogenesis [BR:
bve03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AK36_219
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AJY07617
LinkDB
All DBs
Position
I:complement(238881..240989)
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AA seq
702 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAASELMQEADTA
AQQIDLDFLWECAPAEEFAYTTLAAEYFGAGYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKEGKLPQAFAGKVLALLTRPDKNSIEYKA
LEAAAGARGVSPARLMLDCGGIESARALHEARFLAEFFPHGTGFPPVAVGPLPDDLPRAD
VNAFSIDDITTTEIDDAFSVEHLADGRVRIGVHIAAPALGIVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVDRDTQEIVANETRAELVYVKNNLRHNT
LDELVNEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYSAYADYQRRMEYFWCLRWLAQEQKKQVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLEVMSLDELTIEASVRPLSVLDAPTVTSGDGADEEDDAEGEGGDDTLVDAQ
DASAESEAEALAESDGAVAEGGDAATGGEHESEPESAPGRAS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagttgcccggcgggcggcgcgcgaaggtgcgcgcaaaggac
gtgctgatcgagttcgagaagccggccgcgagcgagctgatgcaggaagccgacacggcc
gcgcagcagatcgacctcgacttcctgtgggaatgcgcgccggcggaggaattcgcctat
acgacgctggccgccgaatacttcggcgcgggctacggcccggtcgagcgcgcggcgctg
gtgctacggctgcacggctcgcccgtgtacttccgccgcaaaggccgcggccaatatcag
cgcgcgccggaagagcagctgaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctggtgcaggcgcagtacgaagaggagctgaaggaaggcaagctgccgcaagcgttc
gccggcaaggtgctcgcgctgctgacgcgaccggacaagaattcgatcgaatacaaggcg
ctcgaggcggcggccggggcgcgcggcgtgtcgcccgcgcggctgatgctcgactgcggc
ggcatcgagtccgcccgcgcgctgcacgaggcgcgctttctcgccgagttcttcccgcac
ggcacgggctttccgcccgtcgcggtcggcccgctgccggacgacctgccgcgcgcggac
gtcaacgcgttctcgatcgacgacatcacgacgaccgaaatcgacgacgcgttctcggtc
gagcatctggcagacggccgcgtgcggatcggcgtacacatcgcggcgccggcgctgggc
atcgtgcgcggcgacgcggtcgacgcgatcgcgcgcgcgcgtctgtcgacggtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtggtcgacgtcttcacgctaaaggag
ggcgactaccgcccggcgctgtcgttgtacatcatcgtcgatcgcgatacgcaggagatc
gtcgcgaacgagacgcgcgccgagctcgtgtacgtgaagaacaacctgcgccacaacacg
ctcgacgagctggtcaacgaggagacgctcgcggccggcaccggcgattacccgcacaag
gacgacatcgcggtgctgtggccgctcgcgcaggcgctgttcgagaagcgccaggtcgcg
cgcgcgggctacggcctgaagcgcgaggtgcagcgcaataccgactacaacttctacgtc
gaaggcgagcacgtgacgatcacgccgcgccgccgcggctcgccgctcgacctgatcgtg
tcggagctggcgatcctcgcgaactcgacctggggcgcgttcctgcacgatcacacggtg
ccgggcatctaccgctcgcagcgcggcttcggcgcgccgggcccgaagcgcacgcggatg
cagacgacggccgcgccgcacgaagggctcggcgtcgcgcagtatgcgtggagcacgtcg
ccgctgcgccgctacgtcgacctcgtgaaccagtggcagctgctcgcctgcgtgcagcac
ggcgtcaccgcgaagctcgccgcgccgttcaagccgaaggacgccgacctgtacgcggtc
gtgcagggcttcgacgacacctatagcgcctacgccgactaccagcgccggatggaatac
ttctggtgcctgcgctggctcgcgcaggagcagaagaagcaggtagtcgcgagcgtcgtg
aagggcgatctcgtgcgcctcgaggaaattccgctgctgctgcacgtgccggggctgggc
gtgcatgcgcgcggcacgcgcgtgctgctcgaggtgatgtcgctcgacgagctgacgatc
gaggcgtcggtgcggccgctgagcgtgctcgacgcgccgaccgtgacgagcggcgatggg
gccgacgaagaagacgacgccgaaggcgaaggcggcgacgacacgctggtcgacgcgcag
gatgcgtcggcggaatcggaagccgaggcgctggccgaatcggacggcgccgtggccgaa
ggcggcgacgccgcaaccggcggcgagcacgaaagcgagccggaaagcgcaccgggacgc
gcatcatga
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