Burkholderia vietnamiensis LMG 10929: AK36_2539
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Entry
AK36_2539 CDS
T03893
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bve
Burkholderia vietnamiensis LMG 10929
Pathway
bve03420
Nucleotide excision repair
bve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AK36_2539
03430 Mismatch repair
AK36_2539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bve03400
]
AK36_2539
Enzymes [BR:
bve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AK36_2539
DNA repair and recombination proteins [BR:
bve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AK36_2539
MMR (mismatch excision repair)
Other MMR factors
AK36_2539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJY05843
LinkDB
All DBs
Position
I:complement(2754938..2757301)
Genome browser
AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPATVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDATDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGAGNAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDAQEAGWIVEEIRSLINTGMSRSEIAVLYRSNAQSRAI
EHTLMTSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFVRVVNFPTRGIGARSI
EQLADAARLYDCSMAAAIPYVTGKAGTSLGAFATLIAKMRAETEQMSLPETVEYVVRASG
LADFYQGEREGQDRLENLQELVNAATAFVSEEGYGLDAPARAIPLRAGAIAAPALRAEAD
DPSVDVLDPAPLDDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHASKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEAGSRWGGRADNAGWGRDWFARPGGGHREQIVDAAVSA
PLPAFADKQRAADTGFRIGQQVFHTKFGEGVVTALEGSGADAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaatctgaaccctgaacaatacgccgccgtcacgctgccgaac
gaaccggcgctgatcctcgcgggggcgggcagcggcaagacccgcgtgctgatcacgcgg
atcgcgtggctgatccagcagggctacgcgtcgccggccaccgtgctggccgtcacgttc
accaacaaagccgcgcgcgaaatgatggcgcggctgtccgcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacgggctgtgcaaccggatgctgcgcacccactgg
cgcgacgcgggcctgccgcagacgttccagatcctcgacacggccgaccagctgtccgcg
atcaagcggctgatgaaggccgcgaacgtcgacgacgaaaaatacccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgtcccgacaaggtcgacgccacc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcatacgatcagcaatgccagcgc
gagggcgtcgtcgacttccccgagctgctgctgcgctgctacgagctgctcgcgtacaac
gcgccgctgcgcgcgcattaccaggcgcgcttccggcacattctcgtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagatgctcgcgggcgccgggaacgcgatc
ttcgcggtcggcgacgacgatcagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacatcctcgacgcggccaaccagctgatctcgaacaacgcgcaccgc
ctcggcaagaacctgcgcaccgacgccggccacggcgagcccgtgcgcgtgtacgaggcg
agcaccgatgcgcaggaagccggctggatcgtcgaggagatccgctcgctgatcaatacc
gggatgtcgcgcagcgagatcgcggtgctgtaccggagcaacgcgcagtcgcgcgcgatc
gagcacacgctgatgacgtcgggcatcccgtatcgcgtgtacggcggcctgcgcttcttc
gagcgtcaggaagtgaagcacgcgctcgcgtatctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgtgcgcgtcgtcaacttcccgacgcgcgggatcggcgcgcgctcgatc
gagcagctcgcggacgccgcgcgcctgtacgactgctcgatggccgccgcgatcccgtac
gtgacgggcaaggccggcacgagcctcggcgcgttcgcgacgctgatcgcgaagatgcgc
gccgagaccgagcagatgagcctgccggagacggtcgagtacgtggtgcgcgcgagcggc
ctcgccgatttctaccagggcgagcgcgaaggccaggaccgcctcgaaaacttgcaggaa
ctcgtgaacgcggccaccgcgttcgtcagcgaggaaggctacgggctcgatgcaccggcg
cgcgcgattccgctgcgcgccggcgcgatcgcggcgccggcgctgcgcgcggaagccgac
gatccgtcggtcgacgtactcgatccggcgccgctcgacgaccccgcgcagaaccccgac
acgatgacgccgctggcgggcttcctgtcgcacgcgtcgctggaagccggcgacaaccag
gcgcaggccggccaggacgccgtgcaactgatgaccgtgcatgcgtccaaggggctcgaa
ttctcggccgtgttcatcaccggcctcgaggaagggttgttcccgcacgaaaacagcgtg
ctcgagtccgacgggctcgaggaggagcgccggctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctatctgtcgttcgcgcagagccgcatgctgcacggccagacgcgctac
aacgtgcgctcgcgcttcttcgacgagctgcccgagcacgtgctgaagtggctcacgccg
aaagtggaagccggttcgcgctggggcggccgcgccgacaacgccggctgggggcgcgac
tggttcgcgcggccgggcggcggccatcgcgagcagatcgtcgatgcggccgtgtccgcg
ccgctgccggcgttcgccgacaagcagcgcgcggccgacaccgggttccgcatcggccag
caggtgtttcatacgaaattcggcgagggtgtggtcaccgcgctcgaaggcagcggcgcc
gatgcaaaggcgcaggtgaagttcaagcggcacggcgagaagtggctcgcgctcgcggtc
gcgaaactgcaggcggtggaatga
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