Burkholderia vietnamiensis LMG 10929: AK36_2723
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Entry
AK36_2723 CDS
T03893
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bve
Burkholderia vietnamiensis LMG 10929
Pathway
bve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AK36_2723 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bve03400
]
AK36_2723 (recB)
Enzymes [BR:
bve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AK36_2723 (recB)
DNA repair and recombination proteins [BR:
bve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AK36_2723 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
AJY06299
LinkDB
All DBs
Position
I:complement(2968256..2971960)
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AA seq
1234 aa
AA seq
DB search
MNAASRSPAALELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVVT
FTKAATAELHERIRGRLAQLAHALDTGDDGGDPFVARLLETTLGEGGALDPDTAAKRIRR
ALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFDMQADDAALRFELAADFWRTRVEPMA
ARWPRFATWLVDSGAGPAALDAQLARRLKKPLAALRWDGVAEPDESAEAAAAACFEQAAQ
MWADERDAIDALLRAAQPALNQRSHKPEAIADAFGAWSAHFAQRNAAAALPKAALRLTRT
ALVKATKKGGATPEHAFFDVADALEAAVAAADAAQRARWLALVADWLDSAPAELAERKRT
RRVVSFDDLLANLYQALQAHPWLGETLRARYPAALIDEFQDTDPLQFAIFDRIFAPRGPL
FLVGDPKQAIYSFRAADLHTYLAARARASACYTLAVNQRSTPAIVDACNRFFMSNPHAFV
LDGLDYYAVRAGTRVRAPFIDETDPGPAGDFRIWALPGGDGTLHKREAQAQAAQACAAEI
ARLMRGARDGHARLGDTPLSPGDIAVLVQTHRQGSLVKRVLATWGIGSVELAQASVFSTG
DAEQLERVLAAIDAPGDLRRLRAALAADWFGLDADALWRMEQGDGDASRDAADGADAMSW
VERFSRYRLLWRERGFAVMWRTFTRELRIAERLMAGADGERRVTDINHLAELTQARASAQ
PGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAVVFCPFLNDGGLR
EPPTSALPDAREYHDDAGDAVLHYGCDDEAAAHAARQVLREQAAERARLVYVALTRAVYR
CYLVAGPYLSSRSTREARRSVLNWLVAGAGRSFDAWLDEPPDEAELGAAWQALAGGPLSV
APLPVPARRERVAAGHDDSQALAARRATRMLRDAWRIASFSSLTASMAREEAGVASVPDD
ELRPDHDALAAVSADLALVGADTVVSAPPDDDILTFPRGAAAGECLHRLFELSRFTQPDS
WLQAALGALHDRPVEAEPDLAVRLPAMMVRLVDDVVHTELVPGMRLADLDPARRLDEMGF
LFPAPSLELGALRRLLVAHGYPDVALEAGALAGFIKGFIDMIVEHDGRFWIVDWKSNHLG
NTPDAYGPRALDAAMADHAYHLQALLYTVALHRYLRARLPDYDYDTHMAGYLYLFVRGVR
PGWRSDGMPAGVHAGRPSRELVDALDRMMEGGRA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcatccagatcgccggcggcgctcgaactcgacgtgttcgcatgcccgctc
gacggcgtcaaccagatcgaggcgtcggccggtaccggcaagacgtggaacatctgcgcg
ctctacgtgcggctgctgctcgaaaaggatctcggcgcggacgaaatcctcgtggtgacg
ttcacgaaggccgcgaccgccgaactgcacgagcgcattcgcggccggctggcgcaactc
gcgcatgcgctcgatacgggcgacgacggcggcgacccgttcgtcgcacgactgctggag
acgacgctcggcgaaggcggcgcgctcgatcccgacacggcggcgaagcggatccggcgc
gcgcttcgcgcgttcgatcaggcggctatccacacgatccacgcgttctgccagcgcgcg
ctgcaggaggcgccgttcgccgccgcgatgccgtttgcgttcgacatgcaggccgacgat
gcggcgctgcgcttcgaactggccgccgacttctggcgcacgcgcgtcgaaccgatggcc
gcccgctggccgcgcttcgcgacgtggctcgtcgattcgggcgcgggcccggccgcgctc
gatgcgcagctggcgcgtcggctgaagaagccgctggccgcgctgcgctgggacggcgtc
gccgagcccgacgagtcggcggaggccgcggccgccgcctgcttcgagcaggccgcacaa
atgtgggccgacgagcgcgatgcgatcgatgcgctgctgcgcgccgcgcagccggcgctc
aaccagcgctcgcacaagcccgaggcgatcgccgatgcgttcggcgcgtggtctgcgcac
ttcgcgcagcgcaatgccgcggccgcgctgccgaaggccgcgctcaggctcacgcgcacg
gcgctcgtgaaggcgaccaaaaaaggcggcgcgacgcccgaacacgcgttcttcgacgtg
gccgatgcgctcgaagcagcggtcgcggcagccgacgccgcgcagcgcgcccgctggctc
gcgctggtcgccgactggctcgacagcgcaccggccgagttggcggaacgcaagcgcacg
cgccgggtcgtgtcgttcgacgatctgctcgcgaacctgtatcaggcgctgcaggcgcac
ccgtggctcggcgagacgctgcgtgcgcgctatccggccgcgctgatcgacgaattccag
gataccgacccgctgcagttcgcgatcttcgaccggatcttcgcgccgcgcggtccgctg
tttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggccgatctgcacact
tatctcgccgcgcgcgcacgcgcgagcgcgtgctacacgctcgcggtcaaccagcgttcg
acgccggcgatcgtcgacgcgtgcaaccgcttcttcatgtcgaatccgcacgcgttcgtg
ctcgacgggctcgactattacgcggtgcgtgccggcacgcgcgtgcgggcgccgttcatc
gacgagacagatccgggtccggccggcgatttccggatctgggcgttgccgggcggcgac
ggcacactgcacaagcgcgaggcgcaggcacaggccgcgcaggcgtgcgcggccgagatt
gcgcggctgatgcgcggcgcgcgcgacgggcacgcgcggctcggcgatacgccgctgtcg
ccgggcgacatcgcggtgctggtgcagacgcaccgacagggcagcctcgtgaagcgcgtg
ctcgccacctggggcatcggcagcgtcgagcttgcgcaggcatcggtattctcgacgggt
gacgcggagcagctcgagcgcgtgctcgcggcgatcgacgcgccgggcgacctgcggcgc
ttgcgtgccgcgctcgccgccgactggttcggcctcgatgccgatgcgctgtggcgcatg
gagcagggcgatggcgacgcatcgcgcgatgcggcggacggcgcggatgcgatgagctgg
gtcgagcgcttctcgcgttaccggctgctgtggcgcgagcgcggcttcgcggtgatgtgg
cgcacgttcacgcgcgagctgcggatcgccgagcggctgatggccggcgcggacggcgag
cgccgcgtgaccgacatcaaccatcttgccgagctgacgcaggcgcgcgcgtccgcgcag
ccgggcatcgctccgacgctgcgctggctcgccgcgcaacggctcgacggcggcggcgag
gaggcgcagctgcgtctcgaatccgaccgcaacctcgtgcagatcgtcaccgtccacaaa
tcgaagggcctcgaatacgcggtcgtgttctgtccgttcctgaacgacggcgggctgcgc
gagccgccgacgtcggcgctgcccgacgctcgcgaatatcacgacgacgcaggcgatgcg
gtgctgcattacggatgcgacgacgaagccgccgcgcacgcggcgcgccaggttttgcgc
gagcaggcggcggagcgcgcgcggctcgtctacgtggcgctcacgcgcgccgtctatcgc
tgctatctggtcgccgggccgtatctgtcgtcgcgctcgacgcgcgaggcgcgccgcagc
gtgctcaactggctggtggccggcgcgggccgctcgttcgacgcgtggctcgacgagccg
cccgacgaggcggaacttggcgcagcatggcaggcgctcgcgggcgggccgctcagcgtg
gcgccgttgccggtgcccgcgcgccgcgaacgcgtggcggccggccatgacgactcgcaa
gcgctggcggcgcgccgcgcgacgcgcatgttgcgcgacgcgtggcgcatcgcgagtttc
agttcgctgaccgcgtcgatggcgcgcgaggaagcgggcgtcgcgagcgtgccggacgac
gagttgcggcccgatcacgatgcacttgccgcggtgagcgcggacctcgcgctcgtcggc
gccgacacggtcgtgtcggcgccgccagacgacgacatcctgacgtttccgcgcggcgct
gcggcgggcgagtgcctgcaccgcttgttcgaactgagtcgcttcacccagcccgattcg
tggctccaggccgcgctcggcgcgttgcacgaccggccggtcgaggccgagcccgacctc
gcggtgcggctgccggcgatgatggtgcggctcgtcgacgacgtcgtgcacacggaactc
gtgccgggcatgcggctcgcggatctcgatccggccaggcggctcgacgagatgggcttc
ctgtttccggcgccgtcgctcgagcttggcgccttgcgccggctgctggtcgcgcacggc
tatccggacgtcgcgctggaggccggggcgctcgcgggcttcatcaagggtttcatcgac
atgatcgtcgaacacgacggacgcttctggatcgtcgactggaagtcgaaccatctcggc
aatacgccggacgcgtacggcccgcgcgcgctcgacgctgcgatggccgatcacgcgtat
cacctgcaggcgctgctctataccgtcgcgctgcatcgttacctgcgcgcgcgcttgccc
gactacgactacgacacgcatatggcgggctatctgtatctgttcgtgcgcggcgtgcgg
cccggctggcgcagcgacggcatgccggccggcgtccatgcggggcggccgagccgcgaa
ctcgtcgacgcgctcgaccggatgatggaagggggccgcgcatga
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