Burkholderia vietnamiensis LMG 10929: AK36_2889
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Entry
AK36_2889 CDS
T03893
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bve
Burkholderia vietnamiensis LMG 10929
Brite
KEGG Orthology (KO) [BR:
bve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bve03032
]
AK36_2889 (ihfB)
03036 Chromosome and associated proteins [BR:
bve03036
]
AK36_2889 (ihfB)
03400 DNA repair and recombination proteins [BR:
bve03400
]
AK36_2889 (ihfB)
DNA replication proteins [BR:
bve03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AK36_2889 (ihfB)
Chromosome and associated proteins [BR:
bve03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AK36_2889 (ihfB)
DNA repair and recombination proteins [BR:
bve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AK36_2889 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AJY05378
LinkDB
All DBs
Position
I:complement(3144887..3145210)
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AA seq
107 aa
AA seq
DB search
MTKSELVAQLALRFPQLVLKDADFAVKTMLDAMSDALSKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKFVPHFKPGKELRERVDGRAGEPLKADDPDDER
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcacagctggcactgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaaaacgatgctcgatgcgatgtccgacgctctgtcgaaaggg
catcgcatcgaaattcgcggtttcggcagcttcggcctcaaccgtcgcccggcgcgcgtc
ggacgcaacccgaagtcgggggagaaagtgcaggtgcccgagaagttcgtgccgcacttc
aagcccggcaaggaattgcgtgagcgcgtcgacggtcgcgccggtgagccgctgaaagct
gacgatccggacgacgagcgttga
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