Burkholderia vietnamiensis LMG 10929: AK36_2909
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Entry
AK36_2909 CDS
T03893
Name
(GenBank) type III secretion low calcium response chaperone LcrH/SycD
Organism
bve
Burkholderia vietnamiensis LMG 10929
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_16
TPR_17
TPR_14
TPR_12
TPR_19
TPR_7
TPR_CcmH_CycH
TPR_10
TPR_6
TPR_4
ANAPC3
TPR_Slam
BTAD
TPR_9
TPR_15
TPR-S
TPR_20
Glyco_transf_9
TOM20_plant
ANAPC5
DUF6944
EST1_DNA_bind
TPR_NPHP3
Motif
Other DBs
NCBI-ProteinID:
AJY05130
LinkDB
All DBs
Position
I:3168999..3170837
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AA seq
612 aa
AA seq
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MDSAFDRAYAAHRAGRLAEAEHGYRAALATNPADADALHLFGVLRHQQGQHAEAADLVGR
AVELRPGDAALQLNLGNALKALGRLDEAIDRFRNALTLAPEFPLAHYNLGNAYAALQRHE
DAVDAFGRALRLTPDDASIHNNLGNALNALGRHDDALAAFHRALELRPGHAGAHNNLAMA
LNAMGRANDAIAHFQAALAAEPRFVAAHFNLGNTFEALGRHAEAAAAFEAALALHPPFPL
ALFGLANALSAQGRHRDALPCYERAVGLDPSFSLAWLNLGNAHHALGAHEMALRAFDQAL
RVAPDLTLARLHRAVTLLTLGDFTRGLPAYEARHDTPGATPLGTLPRWQGEPIASRTLLI
RAEQGFGDTLQFVRFVPLARARCARVVLEVQRELVALLAPAAARWRVTLVAQDAAKTPAA
DLGCTLMSLPFLLGLQPGDIAAGARYLDAPDSARRRFRGSLGGQSRRKFGLAWSGRRQAQ
ENRSMPFDALAPLLALPDIDWIVLQPALDADERARVDAHPRVHHLDGRLNDFGDTAALIE
RLDGVVTIDTAVAHLAGALGKPLWVMLPFAADWRWFTGDDCPWYAHARLVRQPAPGQWLD
VAAKVADALRAA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggattccgcattcgaccgagcgtatgccgcgcaccgcgcgggccgcctcgccgaggcc
gagcacggctatcgcgccgcgctcgccaccaatcccgccgatgccgacgcgctccatctg
tttggcgtgctgcggcatcagcaggggcagcatgccgaagcggccgacctcgtcggccgc
gccgtcgagttgcgcccgggcgacgccgcgctgcagctcaacctgggcaacgcgctgaag
gcgctcggccggctcgacgaggcgatcgaccgctttcgcaacgcgctgacgctcgcgccc
gaatttccgctcgcgcactacaacctcggcaatgcgtatgcggcgctgcagcgccacgag
gatgcggtcgacgcgttcggccgcgcgctgcggctcacgcccgacgacgcctcgatccac
aacaatctcggcaacgcgctgaatgcgctcggccggcacgacgacgcgctcgccgcattc
catcgcgcactcgagctgcgccccggacacgccggcgcgcacaacaatctcgcgatggcg
ctgaacgcgatggggcgcgcaaacgacgcgatcgcgcacttccaggccgcgctcgccgcc
gagccgcgcttcgtggccgcgcatttcaacctcggcaacacgttcgaagcgctcggccgc
catgccgaggccgccgccgcattcgaagcggccctcgcgctgcacccgccgtttccgctc
gccctgttcgggctcgcgaacgcactgagcgcgcagggccgccaccgcgacgcgctgccc
tgttacgagcgcgcggtcggcctcgatccgtcgttcagcctcgcgtggctgaacctcggc
aacgcgcatcacgcgctcggcgcgcacgagatggcgctgcgcgcgttcgaccaggcgctg
cgcgtcgcgcctgacctcacgctcgcacggctgcaccgcgccgtcacgctgctcacgctc
ggcgacttcacgcgcgggctgcccgcctacgaagcgcgtcacgacacgcccggcgcaacg
ccgctcggcacgctgccgcgctggcaaggcgagccgatcgcgtcgcgtacgctgctgatt
cgcgccgagcagggtttcggcgacacgctgcagttcgtccgcttcgtaccgctcgcccgc
gcgcgctgcgcgcgcgtcgtgctcgaagtgcagcgcgagctcgtcgcgctgctcgcccct
gccgccgcgcgctggcgcgtcacgctggtcgcgcaggacgccgcgaaaacgcccgctgcg
gacctcggatgcacgctgatgagcttgccgttcctgctcggcctgcaaccgggcgacatc
gccgcgggcgcgcgctatctcgacgcgccggacagcgcgcgccggcgctttcgcggctcg
ctcggcgggcagtcgaggcgcaagttcgggctcgcatggtccgggcgccgacaggcgcag
gaaaaccgctcgatgccgttcgatgcgctcgcgccgctgctcgcgctgcccgacatcgac
tggatcgtgctgcagcccgccctggacgccgacgagcgcgcgcgcgtcgacgcgcatccg
cgcgtgcatcacctcgacggccggctgaacgacttcggcgatacggcggcgttgatcgag
cggctcgacggcgtcgtcacgatcgacacggccgtcgcccatctcgcgggcgcgctcggc
aagccgctgtgggtgatgctgcctttcgcggccgactggcgctggttcaccggcgacgac
tgtccgtggtacgcgcatgcacggctcgtccgccagcctgcgccggggcaatggctcgac
gtcgcggcgaaagtcgccgacgcgctacgcgcggcctga
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