Burkholderia vietnamiensis LMG 10929: AK36_5616
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Entry
AK36_5616 CDS
T03893
Name
(GenBank) coiled stalk of trimeric autotransporter adhesin family protein
KO
K21449
trimeric autotransporter adhesin
Organism
bve
Burkholderia vietnamiensis LMG 10929
Brite
KEGG Orthology (KO) [BR:
bve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bve02000
]
AK36_5616
Transporters [BR:
bve02000
]
Other transporters
Pores ion channels [TC:
1
]
AK36_5616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Baculo_PEP_C
DUF7070
DGCcoil
Motif
Other DBs
NCBI-ProteinID:
AJY08225
LinkDB
All DBs
Position
III:complement(650670..655055)
Genome browser
AA seq
1461 aa
AA seq
DB search
MKRKQISTLVTAMFAGVGILGAGIAHATGSANFVDRGNPDNALTGQCIDGTNPLCVATKN
GSNVATSTASYTAGNNAQAGLAGIAIGDRANANSKDTSGSGGGATAIGTGAQAVANSATA
IGTVALAQGNTSLAIGRQSAAIGDYSMALGNVADAHGTSSIALGHSALAQGDRSVAIGGA
NPTTSDGVSAGASYDAATQTRAAGTQSVAIGAGAQTNGDNQIAIGSGSVGVANNTSKPVF
GGTAAPVGGAVSFGSLGNERQLKNVAAGVDATDAVNISQLKSVNDGLTTSINAVDARVTT
LNTTIGGQITNINASLSTATSNITNLQAADKQNVKYTDSTHSAISLDGSGGTTIRNVKAG
VASTDATNVGQLNAGLSTVQGNVNTQISNLGSSLSTSIINATKDAVLYDSSKHDSVTFGG
TGATSPVALHNVAAGTADADAVNVKQLNSSIGTAVAPINQNITNIQTSLSTTNQTVANLS
TSVTNINTSLSTATSDITQLQQADTRNVKYDGQSGFDTVTLQGSNGTTIKNVADGKDAHD
AVNVGQLSGGLSSLSTSVTNSVNTQIGNLSTTVSNQISSATKNAVQYDNDAHTSVTLGGP
GASGPVNLHNIADGVGNNDAVNVGQLSGAISPIQSSLSSAVSNITNLQGNVTDLSTALGT
TNQSVTNLSTSLAGTQTDVSNLQAADKRNVKYDGPQGFDSVTLAGPNGTRVTNVKAGELS
AASTDAVNGSQLYATNQTVAKQGDAITKIGGQVTQTATDIRNIGGQVTQNTTNIGALQQD
ALQWSASAGAYDASHGSGSAQKITNVAAGDISTTSTDAINGAQLKHVQDELNTQIGGATK
NAVVYDTDANGNRLNSVTLSGGAAGPVAIKNVASGSLNTTSTDAVNGSQLFATNQNVATQ
TARVDNLTSNVSTLSSNLTTTNANVVNLQEADKLNVKYDGSDKSVVTLGGAAHAPVKVSN
VADGVASSDAVNVGQLSKATGSLQQQIGAQGDTITSIDQRVTTNTTDIASLKQDALQFDP
STGAYNAAHGGSTTKIVNVADGNVAAGSKDAVNGGQLFGVKSDLEQQITNVSNQAGEAVK
NVVKYDVDANGTRLNSVSLVGGDATSPVVLKNVAAGVDDTDAVNVKQLKSVQSNINQLGA
MAVTYDDGSKSIITLGGGSGGTKITNVQAGTLSASSTDAVNGSQLYSTNQQVTKNTTDIT
NLQQDVSNVANGKAGLVQQQDPNGQITVGAGSGGTSVNFSGTAGDRVLTGVAAGTNNNDA
VNVGQLNTALKIVETDQRIKAQATDANTSWISRADAGSFGSTATASGKNAVAVGQGSVAD
RDNSFSVGAKGSERQVTNVAAGTAPTDAVNVQQLNDNIASASAASRGYTDQRIGQVYNSF
NDLKKDMYGGVASAMAVAGLPQPTAPGRSMVSAATANYHGQQGFAAGYSYVTQNEKWVVK
ASVTGNNRSDFGAVVGAGYQF
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagcaaatctcgacgcttgtaacggcaatgttcgcgggcgtaggcatcctg
ggtgctggcattgcgcatgcaaccggtagcgcgaatttcgtagaccgaggcaatccggac
aacgccctcaccggacagtgtattgacggcaccaatccgctttgtgttgcgacgaagaac
ggttcgaatgtcgccacaagtactgcaagctacacggccgggaacaatgcgcaagccggt
cttgctggcattgcgatcggcgaccgagctaacgcgaacagtaaagacacgagcggtagt
ggtggcggtgcaaccgcgatcgggaccggcgcgcaggccgtcgccaattcagcgactgcg
attgggactgtcgcactcgcgcaaggtaatacctcacttgcgatcggtcgccaatcggct
gctattggcgattattcgatggcgctcggcaacgttgctgatgcgcacggaaccagctcg
attgcgcttggccactcggccctggcacaaggcgaccgctcggtcgcgatcggtggtgca
aatccgaccacaagcgatggtgtttcggcaggcgcatcctacgacgctgcaacgcagaca
cgtgccgcaggcacccaatcggtcgcgattggtgcgggcgcccagacgaatggtgacaat
cagatcgccatcggatccggaagcgtcggcgtagcgaacaataccagcaagccggtgttt
ggcggaacggctgcaccggtcggcggtgctgtctcgttcggctcgctcggcaatgaacgc
cagctgaagaatgtcgcggctggcgttgacgcgacggacgctgtcaacatttctcagctg
aagtcggtcaacgatgggttgaccacgagcatcaatgcggtcgatgctcgtgtgacgacg
ctgaatacgacgattggcggtcaaatcacgaacatcaacgcttcgctgtcgactgccacc
agtaacattaccaacctgcaagctgccgataagcagaacgtgaaatacacggacagcacg
catagcgcgatatcactggacggtagcggcggcacgacgatcagaaacgtgaaggctggt
gttgctagcacggacgccacaaacgtcgggcagttaaatgcgggtctgtcgaccgtgcag
ggcaacgtcaatacgcaaatttccaatctcggtagctcgctgagtacgtcgatcatcaac
gcaacgaaagacgcggttctgtatgacagcagcaagcacgacagtgtgacgttcggcggc
accggcgcaacatcgccggtcgctctacacaacgtggccgccggcacagcggatgccgat
gccgtcaacgttaagcagttgaatagcagcatcgggacggccgtcgcgccgatcaaccag
aacattacgaacattcagacgtcgctgagcaccaccaaccagacggttgcgaacctaagc
acgagcgtcacgaacatcaacacgtcgttgagcacagccacgtcggatattacgcagttg
cagcaggccgatacccgcaacgtgaaatatgacgggcagtcgggtttcgacacggtgacg
ctgcaaggaagcaacggcacgacgattaagaatgtggcggacggcaaggacgcgcacgat
gcggtgaacgtcggtcaactgagcggtggtctgtcgtcgctgagcaccagcgtaacgaac
agtgtcaacacgcagatcggcaatctcagcacgacggtcagtaatcagatcagttcggcc
acgaagaatgccgtgcagtacgacaatgatgcgcatacgagcgtgacgctcgggggcccg
ggcgcaagcggtccggtcaacctgcacaacatcgcagacggcgtgggaaataacgatgcc
gtcaacgtcgggcaattgagtggcgcgatttcaccgatccagtcgtccttgtcctccgct
gtctcgaacatcacgaatctgcaagggaatgtcacagacctgagcacggcgctcggtacg
accaaccagagcgtcacgaacctcagtacgagcctcgccggtacgcagaccgatgtgtcg
aacctgcaagctgccgacaaacgaaatgtcaaatacgatggaccgcaaggcttcgattcc
gtcacgctcgcgggtccgaacggcacgagggtgacaaacgtcaaggcgggtgagctgtcc
gcggcgagcacggacgccgtcaacggctcgcaactgtatgcgacaaatcagactgtcgcg
aaacagggcgacgccatcacgaaaatcggcggccaagtgacgcagaccgcaaccgacatc
aggaacatcggtggccaggtcacgcagaacacgaccaacattggtgcgctgcaacaggac
gcgctgcagtggtcggcatccgctggtgcatacgatgcctcgcatggcagcggttcggcg
caaaagatcaccaacgttgctgctggcgatatatcgacaacgagcaccgatgcgatcaac
ggcgcgcaattgaagcatgtgcaagacgagctaaatacgcaaatcggtggtgcaacgaag
aacgctgtcgtgtacgacacagatgcaaacggcaatcgcctcaattcggtgacactctcg
ggtggtgccgctggcccggtggcaatcaagaacgttgcgtctggttcgctgaatacgacg
agcactgatgcggttaacggctcgcagctgttcgcgaccaatcagaatgttgcgacgcag
acagcccgtgtcgataatttgacgtcgaacgtgtcgacgctgtcgagcaatttgacgacg
acgaacgcgaatgttgtcaaccttcaggaagccgacaagctgaatgtcaagtacgacggc
agcgataagagcgtcgttacgctcgggggggctgcacatgctcccgtgaaggtctcgaat
gtcgcagatggcgtcgcgagcagcgatgcagtcaacgtcggccagttgtcgaaagcaacc
ggaagcctgcagcagcagatcggcgcgcaaggtgacacgatcacgtcgatcgatcaacgc
gtaacgacaaacaccaccgatatcgcatcactcaagcaggacgcgctgcagtttgatccg
agcaccggcgcttacaatgcggcgcacggcggttcgacgacgaagattgtcaatgtcgcg
gacggcaatgtcgcggcgggcagcaaagacgcggtcaacggtggtcaactattcggcgtg
aagtccgatctcgagcagcagatcacgaacgtgtcgaaccaggccggcgaggcggtgaag
aatgtcgtgaaatatgacgtggacgcaaacggtacccgtctgaactccgtgtcgctcgtc
ggcggcgatgctacgtcgccggtggtcctaaaaaacgtggcagcgggcgtcgatgatact
gacgcagtgaacgtgaagcagctcaagagcgtccaatcgaacattaaccaactcggtgcg
atggcggttacatacgacgacggctccaagagcatcattacgctcgggggcggttctgga
ggtacgaagatcacgaacgtgcaggctggcacgctcagcgcttccagtacggacgcggtg
aacggttcgcaactctactcgacgaatcagcaagtcacgaagaatacgaccgacatcaca
aacctgcagcaagatgtgtccaatgtcgcgaacggcaaggcgggtttggtccagcagcag
gatccgaacggtcaaatcacggtcggtgccggatccggtggcacatcggtgaatttttcc
ggcaccgcaggcgatcgcgtgctgaccggtgttgcagcgggcactaacaacaacgatgcg
gtcaacgttggccagctcaataccgctctcaagattgtggagaccgatcaacgaatcaaa
gcgcaagcaaccgatgccaatacgagctggatctcgcgggcggatgccggatcattcggt
tccactgcaaccgcaagcggcaagaacgctgtcgcagttggccaaggatcggtggccgat
cgcgacaactcgttctcggtcggtgcgaagggaagcgagcgtcaggtcacgaacgtggcg
gccggtacggcgccgacggatgcggtgaacgtgcagcagttgaacgacaacatcgcatcg
gcatctgctgcatcgcgcggctacaccgatcagcgtatcggacaggtgtacaactcgttc
aacgatctcaaaaaggatatgtacggtggggttgcgtcggcgatggcggttgctgggttg
ccgcaaccgaccgccccgggtcgctcgatggtatcggccgcgacggcgaactaccacggt
cagcaaggtttcgcggcaggctattcgtacgtgacgcaaaatgagaagtgggtcgtcaag
gcgtcggtgaccggcaacaatcgttccgacttcggtgcagtggtcggcgcggggtaccag
ttctga
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integrated database retrieval system
