Burkholderia vietnamiensis LMG 10929: AK36_5990
Help
Entry
AK36_5990 CDS
T03893
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bve
Burkholderia vietnamiensis LMG 10929
Brite
KEGG Orthology (KO) [BR:
bve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bve03032
]
AK36_5990
03400 DNA repair and recombination proteins [BR:
bve03400
]
AK36_5990
Enzymes [BR:
bve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AK36_5990
DNA replication proteins [BR:
bve03032
]
Prokaryotic type
DNA Topoisomerases
AK36_5990
DNA repair and recombination proteins [BR:
bve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AK36_5990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AJY09038
LinkDB
All DBs
Position
III:1138896..1139954
Genome browser
AA seq
352 aa
AA seq
DB search
MTKRPSRSNGGAWVDAALRHVDDRHPGYTRRRVRNGFAYYGQDGQRIRDPDEIARINALA
IPPAYTDVWICMDRRGHLQATGRDARGRKQYRYHPLWRETRDANKYARMAAFAAALPRIR
ARVARDLALPGMPRDKIVATIVRLLDTTLARIGNTEYARENASFGLTTLRKRHVTIRPGQ
VRLRFTGKSGIEHDVTVQDPRVGRIVRRCAELPGHELFQYVDDDGARHSVGSSDVNDYLR
EAAGAEFTAKDYRTWAGSVQALALLRRIPHESVTQARKQIVETVRAVAGILRNTPAVCRR
CYIHPVVLDTFEAGLLDTFEVTRKPRGLRADEAAFVALLEQAERRSARPQKK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcgcccgtcccgctcgaacggcggcgcgtgggtggacgccgcgctgcgccac
gtcgacgaccggcatcccggctatacgcgccggcgcgtgcgcaacggcttcgcgtattac
ggacaggacggccagcgcatccgcgaccccgacgaaattgcacgcatcaacgcgctggcg
attccgcccgcgtacaccgacgtgtggatctgcatggaccggcgcggccatctgcaggcc
acgggccgcgacgcgcgcgggcgcaagcagtaccgctatcacccgctgtggcgcgagacg
cgcgacgcgaacaagtacgcgcggatggccgccttcgcggctgcgctgccgcggatccgc
gcgcgtgtcgcgcgcgacctcgcgctgccgggaatgccgcgcgacaagatcgtcgcgacc
atcgtccgcctgctcgacaccacgctggcgcggatcggcaacaccgaatacgcacgcgag
aacgcgtcgttcgggctgacgacgctgcgcaagcgccacgtgacgatccggcccggacag
gtgcggctgcgcttcaccggcaagagcggcatcgagcacgacgtgacggtgcaggacccg
cgcgtgggccgcatcgtgcgacgctgcgcggagctgccggggcacgagctgttccagtat
gtggacgacgacggcgcgcgccattcggtcggctcgtccgacgtgaacgactacctgcgc
gaagcggcgggcgcggagttcaccgcgaaggactaccggacctgggccggcagcgtgcag
gcgctggcgctgctcaggcgcatcccgcacgagagcgtcacgcaggcgcgcaagcagatc
gtcgagacggtacgggccgtcgccggcatcctgcgcaacacgccggcggtgtgccggcgt
tgctacatccatccggtggtgctcgacacgttcgaggccggcctgctcgacacgttcgag
gtgacgcgcaagccgcgagggctgcgcgcggacgaagcggcgttcgtcgcattgctcgag
caggccgagcgccgctcggcccggccgcagaaaaaatga
DBGET
integrated database retrieval system
