Burkholderia vietnamiensis LMG 10929: AK36_775
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Entry
AK36_775 CDS
T03893
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bve
Burkholderia vietnamiensis LMG 10929
Pathway
bve03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AK36_775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bve03400
]
AK36_775
Enzymes [BR:
bve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AK36_775
DNA repair and recombination proteins [BR:
bve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AK36_775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
AfAlkA-like_TBP-like
Motif
Other DBs
NCBI-ProteinID:
AJY06824
LinkDB
All DBs
Position
I:836622..837620
Genome browser
AA seq
332 aa
AA seq
DB search
MSIEQTTLAASECDSGDSGDRGGAVPSPARLELRFNAPYDWARVLRFFSGRAIPGVEQVA
DGVYRRVVDLNGDAGRLTVSKHPRRHCLIATVDGAAARHVDGAFARRVASMFDLAADPAA
IGSGLARDPWFAPLVDAAPGLRVPGAWSGFELAVRAIVGQQVSVKAATTIVGRLVQRAGE
RVVRDDGTPDDDGAPAWRFPTPDALAACDLVKIGMPGKRAAALTGMARAVADGHVPLDPA
HADLATLRRAWLELPGIGPWTVEYIAMRAWRDPDAWPASDLVLMQSIAARDPSLDRLASQ
KRRTEAWRPWRAYAALHLWNDVADRAGGARGG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatcgaacagaccacgctcgcggcgagcgagtgcgatagcggtgatagcggcgac
cgcggcggcgcggtgccgtcgcccgcgcggctggagctgcgcttcaacgcgccgtacgac
tgggcgcgcgtgctgcggttcttcagcggccgcgcgattccgggcgtcgagcaggtcgcc
gacggcgtttatcgtcgcgtcgtcgacctgaacggcgacgcgggccggctcaccgtgtct
aagcatccgcgccggcattgcctgattgcgacggtcgacggcgcggctgcgcgccatgtc
gatggcgcgttcgcgcgccgtgtcgcatcgatgttcgacctcgctgccgatccggccgcg
atcggcagcgggctcgcgcgcgatccgtggttcgcgccgctcgtcgacgccgcgccgggg
ctgcgcgtgccgggcgcatggtcgggattcgagctggcggtgcgtgcgatcgtcggccag
caggtgagcgtgaaggccgcgacgacgatcgtcgggcggctcgtccagcgcgccggcgag
cgtgtcgtgcgggacgacgggacacctgacgacgacggcgcgccggcatggcgttttccg
acgcccgacgcgcttgccgcgtgcgatctcgtgaagatcgggatgcccggcaaacgagcg
gccgcgctgacgggcatggcgcgcgcagtggcggacggacacgtgccgctcgacccggcg
catgcggacctcgcgacgttgcggcgcgcatggctcgagctgcccggcatcgggccgtgg
accgtcgagtacatcgcgatgcgcgcgtggcgcgatccggatgcatggccggcgtccgat
ctcgtgctgatgcagtcgatcgccgcccgcgatccgtcgctcgaccggctcgcgagccag
aaacgccgaaccgaagcgtggcggccgtggcgcgcgtatgcggcgcttcatctgtggaac
gacgtggctgaccgggcgggaggcgcgcgcgggggatga
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