Bosea vestrisii: QO058_00275
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Entry
QO058_00275 CDS
T09164
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bves
Bosea vestrisii
Pathway
bves03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bves00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QO058_00275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bves03019
]
QO058_00275
Messenger RNA biogenesis [BR:
bves03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QO058_00275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
RNase_J_C
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
WID96771
LinkDB
All DBs
Position
58550..60220
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AA seq
556 aa
AA seq
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MTRSSDQLVFVPLGGLGEIGMNAALYGFGPEKKRKWILVDCGLSFAGPEAPGVDIVLPDL
TYIIQDKANLLGIVITHAHEDHIGALAALWPSLRVPVWCTRFAAGLLATRRLSEPGAPKV
EMNIVAQGGRFTLGPFDIEFVPVAHSIPESNALAIRTAAGLVVHTGDWKIDPTPQVGLPT
DEKRLRELGEEGVLALVCDSTNVLRDGISPSEADVAAKLKELVASAPNRVAVTTFASNVA
RLRAVAEAAMANQREVVVVGRAMDRVIDVARECGFLNGIPAFRGVDTYGYLPRDKVVALV
TGSQGEPRAALSRIAADDHPEIALSPGDRVIFSSRTIPGNEKAVSAILNKLARDDIEIIT
DRTHLVHVSGHPRREEMARLYGWLKPKIAIPAHGEDLHLSEHATFARSLGVKHVLRAGNG
DVIAITEDGARKLSEVQHGRLYQDGTLLVGALDRTIPERRKLSFAGVISIAVALDEKGEL
AGDPEIALVGLPLAAKDGTPFDDIVADAVEDLIEGMPKGKRRDPEAVCNALERGVRSAVN
EEWGKKPLVNALVITV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgttccagcgaccagctcgtcttcgttccgctcggcggccttggcgagatcggc
atgaacgccgcgctctacggcttcgggccggaaaagaagcgcaaatggatcctggtcgat
tgcgggctctcctttgctgggccggaagcgccgggcgtcgatatcgtcctgcccgacctg
acctatatcatccaggacaaggccaacctgctcggcatcgtcatcacccatgcccatgag
gatcatatcggcgcgctcgccgcgctctggccctcgctgcgcgtgccggtctggtgcacg
cgtttcgccgccggcctgctggcgacgcgccgcctgtccgagccgggcgcgcccaaggtc
gagatgaacatcgtcgcccagggcggacgcttcacactcgggcccttcgacatcgaattc
gtgcctgtggcgcactcgatcccggaatcgaacgcgctcgcgatccgcaccgcagccggc
ctcgtcgtccatactggcgactggaagatcgacccgacgccgcaggtcggcctgccgacc
gatgagaagcgcctgcgcgaactcggcgaggagggcgtgctggcgctggtctgcgattcg
accaacgtcctgcgcgacggtatcagtccgagcgaggccgacgtcgccgccaagctcaag
gagctggtcgcttccgcccccaaccgcgtcgccgtcaccaccttcgcctcgaacgttgcg
cgcctgcgggcggtcgccgaggctgccatggccaatcagcgcgaagtggtcgtcgtcggt
cgtgccatggaccgggtcatcgacgttgcgcgtgaatgtggcttccttaacggcatcccg
gctttccgcggagtcgatacctatggctacttgccgcgcgacaaggtggtcgcactggtg
accggcagccagggcgagccgcgcgctgcgctttcgcgcatcgccgccgacgatcatccc
gagatcgcattgtctccgggcgaccgggtgatcttctcctcgcgcacgatccccggcaac
gagaaggcggtcagcgccatcctgaacaagctcgcgcgcgacgatatcgagatcattacc
gaccgcacccatctcgtacacgtgtccggccatccccgccgcgaggagatggctcggctc
tacggttggctgaagccgaagatcgcgatccccgctcacggcgaggacctgcacctcagc
gagcacgccaccttcgcccgcagcctcggcgtcaagcatgtgctgcgcgccggcaatggc
gacgtgatcgcgatcaccgaagacggagcgcgcaagctctccgaggtccagcacggtcgg
ctctaccaggatggcaccctcctggtcggagcgctcgaccgcaccattcccgagcgccgc
aagctctccttcgccggcgtgatctcgatcgcggtggcattggatgagaagggcgagctc
gccggcgatcccgagatcgctctcgtcggattgccgctcgccgccaaggacggcacgccc
ttcgacgatatcgtcgccgacgcggtcgaggacctgatcgagggcatgcccaaggggaag
cgccgcgatcccgaggctgtgtgcaacgcgctcgaacgcggcgtccggagcgccgtcaac
gaggagtggggcaagaagccgctggtgaatgcgctggtgatcacagtgtag
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