KEGG   Bosea vestrisii: QO058_00275
Entry
QO058_00275       CDS       T09164                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bves  Bosea vestrisii
Pathway
bves03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bves00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QO058_00275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bves03019]
    QO058_00275
Messenger RNA biogenesis [BR:bves03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     QO058_00275
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 RNase_J_C Lactamase_B RMMBL Anti-Pycsar_Apyc1 ssDNA-exonuc_C
Other DBs
NCBI-ProteinID: WID96771
LinkDB
Position
58550..60220
AA seq 556 aa
MTRSSDQLVFVPLGGLGEIGMNAALYGFGPEKKRKWILVDCGLSFAGPEAPGVDIVLPDL
TYIIQDKANLLGIVITHAHEDHIGALAALWPSLRVPVWCTRFAAGLLATRRLSEPGAPKV
EMNIVAQGGRFTLGPFDIEFVPVAHSIPESNALAIRTAAGLVVHTGDWKIDPTPQVGLPT
DEKRLRELGEEGVLALVCDSTNVLRDGISPSEADVAAKLKELVASAPNRVAVTTFASNVA
RLRAVAEAAMANQREVVVVGRAMDRVIDVARECGFLNGIPAFRGVDTYGYLPRDKVVALV
TGSQGEPRAALSRIAADDHPEIALSPGDRVIFSSRTIPGNEKAVSAILNKLARDDIEIIT
DRTHLVHVSGHPRREEMARLYGWLKPKIAIPAHGEDLHLSEHATFARSLGVKHVLRAGNG
DVIAITEDGARKLSEVQHGRLYQDGTLLVGALDRTIPERRKLSFAGVISIAVALDEKGEL
AGDPEIALVGLPLAAKDGTPFDDIVADAVEDLIEGMPKGKRRDPEAVCNALERGVRSAVN
EEWGKKPLVNALVITV
NT seq 1671 nt   +upstreamnt  +downstreamnt
gtgacccgttccagcgaccagctcgtcttcgttccgctcggcggccttggcgagatcggc
atgaacgccgcgctctacggcttcgggccggaaaagaagcgcaaatggatcctggtcgat
tgcgggctctcctttgctgggccggaagcgccgggcgtcgatatcgtcctgcccgacctg
acctatatcatccaggacaaggccaacctgctcggcatcgtcatcacccatgcccatgag
gatcatatcggcgcgctcgccgcgctctggccctcgctgcgcgtgccggtctggtgcacg
cgtttcgccgccggcctgctggcgacgcgccgcctgtccgagccgggcgcgcccaaggtc
gagatgaacatcgtcgcccagggcggacgcttcacactcgggcccttcgacatcgaattc
gtgcctgtggcgcactcgatcccggaatcgaacgcgctcgcgatccgcaccgcagccggc
ctcgtcgtccatactggcgactggaagatcgacccgacgccgcaggtcggcctgccgacc
gatgagaagcgcctgcgcgaactcggcgaggagggcgtgctggcgctggtctgcgattcg
accaacgtcctgcgcgacggtatcagtccgagcgaggccgacgtcgccgccaagctcaag
gagctggtcgcttccgcccccaaccgcgtcgccgtcaccaccttcgcctcgaacgttgcg
cgcctgcgggcggtcgccgaggctgccatggccaatcagcgcgaagtggtcgtcgtcggt
cgtgccatggaccgggtcatcgacgttgcgcgtgaatgtggcttccttaacggcatcccg
gctttccgcggagtcgatacctatggctacttgccgcgcgacaaggtggtcgcactggtg
accggcagccagggcgagccgcgcgctgcgctttcgcgcatcgccgccgacgatcatccc
gagatcgcattgtctccgggcgaccgggtgatcttctcctcgcgcacgatccccggcaac
gagaaggcggtcagcgccatcctgaacaagctcgcgcgcgacgatatcgagatcattacc
gaccgcacccatctcgtacacgtgtccggccatccccgccgcgaggagatggctcggctc
tacggttggctgaagccgaagatcgcgatccccgctcacggcgaggacctgcacctcagc
gagcacgccaccttcgcccgcagcctcggcgtcaagcatgtgctgcgcgccggcaatggc
gacgtgatcgcgatcaccgaagacggagcgcgcaagctctccgaggtccagcacggtcgg
ctctaccaggatggcaccctcctggtcggagcgctcgaccgcaccattcccgagcgccgc
aagctctccttcgccggcgtgatctcgatcgcggtggcattggatgagaagggcgagctc
gccggcgatcccgagatcgctctcgtcggattgccgctcgccgccaaggacggcacgccc
ttcgacgatatcgtcgccgacgcggtcgaggacctgatcgagggcatgcccaaggggaag
cgccgcgatcccgaggctgtgtgcaacgcgctcgaacgcggcgtccggagcgccgtcaac
gaggagtggggcaagaagccgctggtgaatgcgctggtgatcacagtgtag

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