Bosea vestrisii: QO058_21470
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Entry
QO058_21470 CDS
T09164
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bves
Bosea vestrisii
Pathway
bves02020
Two-component system
bves02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bves00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QO058_21470 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QO058_21470 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bves03021
]
QO058_21470 (rpoN)
Transcription machinery [BR:
bves03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QO058_21470 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Rv2175c_wHTH
HTH_Crp_2
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WID95328
LinkDB
All DBs
Position
4355073..4356605
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AA seq
510 aa
AA seq
DB search
MAMMPRMELRQGQSLVMTPQLLQAIKLLQLSHLELQSFVEGELERNPLLERSDETPEPGS
LNGAGESPLAVDAETYARAESLNTQEGMEGRLGTGLDNVFQNEQPQAARLETQGADSLPI
IGGAYGGSGGSFDEGPDGFESSLTGELSLHDHLSAQLDLAMTAPAERLIGHHIIDGVDDS
GYLSEPLADIAQRLGVALSRVEAVLAVVQGFDPSGVAARDVSECLAIQLRERNRYDPAMQ
ALLANLPLLAKRDFAALKRICGVDDEDIADMVAEIRRLDPKPGRAFGGSAAETVVPDVFI
RAAPDGSWLVDLNPDTLPRVLVNQTYHARVSKAVRSDVEKAFIAECLQTANWLTRSLEQR
ARTILKVASEIVRQQDGFFAHGVEHLRPLNLKTVADAIGMHESTVSRVTSNKYLACSRGV
FEMKYFFSAAIAATGYGEAHSAEAVRHRIKQMIDEEAPGDVLSDDAIVVKLKGNGIDIAR
RTVAKYRESLRIPSSMERRREKAAMALAIR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatgccacgcatggagctgcgccagggccagtccctggtgatgacgccgcaa
ttgctgcaggcgatcaagctgctccagctctcgcatctcgaactgcagagcttcgtcgag
ggcgagcttgagcgcaatccactgctcgagcgcagtgacgagactccggagccgggttca
ctgaacggtgcgggtgaaagcccgctcgccgttgacgcagaaacctatgctcgcgccgag
agcctcaacacccaggaaggcatggagggcagactcggcaccgggctcgacaatgtcttc
cagaatgagcagccgcaggcggcgcggctggagacacaaggggccgacagcctgccgatc
atcggcggggcctatggtggctccggcggctccttcgacgaggggccggacggtttcgag
agcagcctgaccggcgagctctcgctgcacgatcatctcagcgcccagctcgacctggcc
atgaccgcgccggcggagcgattgatcggccatcacatcatcgatggcgtcgacgattcc
ggctatctgagcgagcctctggccgatatcgcccagcgcctcggcgtcgccctctccagg
gtcgaggcggtgctcgccgtcgtgcagggcttcgacccgagcggtgtcgccgcccgcgat
gtcagcgagtgcctggcgatccagctgcgtgagcgcaaccgctacgacccggcgatgcag
gccctgcttgccaacctgccactcctcgccaagcgtgacttcgccgccctcaagcggatc
tgcggcgtcgacgacgaggacatcgccgacatggtcgccgagatcaggcggctggatccc
aagcctgggcgcgccttcggcggctcggcggcggagacggtggtgccggacgtcttcatc
cgcgccgcgccggacggctcctggctggtcgacctcaaccccgacacgctgccgcgcgtg
ctggtcaaccagacctatcacgcccgcgtctcgaaggcggtgcggagcgatgtggagaag
gcgttcatcgccgaatgcctgcagacggcgaactggctgacccgctcgctcgagcagcgc
gcccgcaccatcctgaaggtcgccagcgagatcgtgcgtcagcaggacggcttcttcgcc
catggcgtcgagcatttgcgcccgctcaacctgaagacggtcgccgatgcgatcggcatg
catgaatcgaccgtctcacgcgtcacctcgaacaaatatctcgcctgctcacgcggcgtc
ttcgagatgaagtacttcttttccgccgcgatcgccgcaaccggctatggcgaggcacat
tcggccgaggccgtgcgccaccgcatcaagcagatgatcgacgaggaggcgccgggcgat
gtgctctccgatgacgccatcgtcgtcaagttgaagggcaacggcatcgacatcgcccgc
cgcaccgtggcgaagtatcgggaatcgctgcgcattccatcctcgatggagcggcgtcgc
gaaaaggcggcgatggcgctcgccatacgctga
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