Bosea vestrisii: QO058_23620
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Entry
QO058_23620 CDS
T09164
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bves
Bosea vestrisii
Pathway
bves03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bves00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QO058_23620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bves03019
]
QO058_23620
Enzymes [BR:
bves01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QO058_23620
Messenger RNA biogenesis [BR:
bves03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QO058_23620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WID95712
LinkDB
All DBs
Position
4808198..4809670
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AA seq
490 aa
AA seq
DB search
MTKFTDLGLAEPLLKALAAEGYETPTPIQAQAIPSIRDGRDLLGAAQTGTGKTAAFSLPM
LHRLMNQPRRMQPRSVRALILSPTRELAAQIEASIRTYAQFTPLKSTVIFGGVPVGKQIR
ALGQHIDILVATPGRLLDLVDQRAVSLREIEFLVLDEADQMLDLGFIHALRKIATLIPKQ
RQTLLFSATMPKAIREIASAYLTDPVEVAVAPVATTAEKVDQRVIFTEAGQKPALLAKTL
SVPEMERAIVFTRTKHGADKVVRQLELAGIKSAAIHGNKSQGQRERALGAFRDGELRILV
ATDIAARGIDVDGISHVVNFDLPNVPETYVHRIGRTARAGASGVAIAFCTPEERGDLAAI
EKLTKIALTPIGDVPHWDGRTPKKPPQNRGRSQGQGRPQAQNGQRRDGRGGQGRNAQRPE
QGERQEQRREQPRPHQARQEQPRHERPAPRHEAGSARKEAVSGKEGLGGVAFLQQRTEQR
RTGGGRRRPN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaagttcaccgacctcggcctggccgagccgcttctcaaagcgctcgccgccgaa
ggttacgagacgccgacgccgatccaggcgcaggcgatcccttccattcgcgacggtcgt
gacctgctcggcgccgctcagaccggcaccggcaagacggctgccttctcgctgcccatg
ctgcaccggctgatgaaccagccgcggcgcatgcagccgcgttccgttcgtgccctcatc
ctgtcgccgacgcgcgagcttgcggcccagatcgaggcgagcatccgcacctacgcccag
ttcaccccgctgaagtcgacggtgatcttcggcggtgttccggtcggtaagcagattcgc
gcgctcggccagcacatcgacatcctcgtcgcgacacccggccgtctgctcgacctcgtc
gaccagcgcgctgtctcgcttcgggagatcgagttcctggtgctggacgaggccgaccag
atgctcgacctcggcttcatccatgcgctgcgcaagatcgcgaccctgatcccgaagcag
cgccagacgctgttgttctcggcgaccatgccgaaggcgatccgcgagatcgcctccgct
tacctgaccgatccggtcgaggttgcggttgcgccggttgcgaccacagccgagaaggtc
gaccagcgcgtcatcttcacggaagcgggccagaagccggccttgctggcgaagaccttg
agcgttcccgagatggagcgcgccatcgtcttcacccgcaccaagcacggtgccgacaag
gtcgtgcgccagctcgagctggctggcatcaagtccgccgcgatccatggcaacaagagc
cagggccagcgcgagcgtgccctcggcgccttccgtgacggcgaactgcgcatcctggtc
gcgaccgatatcgccgcccgcggcatcgatgtcgacggcatcagccatgtcgtcaatttc
gacctgccgaacgtgcctgagacctatgtccaccgcatcggccgcaccgcgcgtgccggg
gcgtcgggcgtggccatcgccttctgcacgccggaagagcgcggcgatctcgccgcgatc
gagaagctgaccaagatcgcgctcaccccgatcggcgacgtgccgcattgggatggccgc
accccgaagaagccgccgcagaatcgtggccgcagccaggggcagggccggccgcaagcg
cagaacggccagcgccgcgacggcaggggcgggcagggccgcaacgcccagcgccccgag
cagggcgagcggcaggagcagcgtcgcgagcagccgcggccgcatcaggcgcgacaggag
cagccgcgccatgagcgccccgctccgcgccatgaggcggggagcgcacgaaaagaagcg
gtttccggcaaggaagggcttggcggcgtggcgttcttgcagcaaagaacggaacaacga
cgcaccggcggcggacggcggcgcccgaactga
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