Beta vulgaris (sugar beet): 104882995
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Entry
104882995 CDS
T03548
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104882995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvg03021
]
104882995
Transcription machinery [BR:
bvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
104882995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
zinc_ribbon_2
DZR_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104882995
NCBI-ProteinID:
XP_010665736
UniProt:
A0A0J8E0H5
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All DBs
Position
8
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AA seq
544 aa
AA seq
DB search
MSFDLTLKPSCGGCGVTTDLYGSNCKHLTLCSSCGKTMAENRAKCYECGATLTRLIREYN
VRASSSNEKNYFIGRFPTGLPNFSKKKSAENKWTLQKEGLQNRQISDALKEKFKNKPWML
EDETGQSQYQGHLEGAQSATYYLLVLQGKEFAAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRKFVDGYERWMMKTASNGAAAFPTFDATLVKDIPTGGGGKGRKKSTAEDEGNASDKG
EDDPEEEGERKAKVGPSKRAGDDDDEEGPAGGDFDDDDDIEKGDDWEHEEIFTDDDEAVG
NDPEEREDLLAPELPAPPEIKQDDDDDDANEEEGGLSKSGKELKKLLGRSNGLNDSDADE
EDDKRKKDEEDDDDEDEEDRPSPVLAPKLKDPKEEAADSSPVKPVPGGSSRATPSTKSAK
GKRKNGDDTKPTSGAPQKKVKTENDVKSTTKDNASKNVAVPKAMPSSLKASTPVQGTPAQ
GPVAEEEIRAVLLQRTQITTNDLVAVFKARLKTSEDKRAFAEILKKISRIQKCDNKNYVV
LRST
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatttaacgctgaagccatcatgtggtggatgtggtgtaacaaccgatctt
tacggcagcaattgcaagcatctgacgctttgttcgagctgcggtaaaactatggcggag
aatcgtgcgaaatgctacgaatgtggcgctactctcactcgtttgattcgtgagtataat
gtgagggcgagctcgagcaatgaaaagaattattttatagggagatttccgacgggattg
ccgaatttctctaagaagaagagtgcggagaataagtggactttgcagaaagaagggctt
caaaatcgccagattagcgacgctttgaaggagaaattcaagaataagccttggatgctg
gaagatgaaactggtcaatcacagtaccagggtcatctggaaggagcgcaatcagctaca
tattatctacttgtgttgcagggaaaagagtttgctgcaataccagctggttcttggtac
aacttcaataaagttgcgcaatataagcaacttactttagaagaagcagaggagaagatg
aaaaataggagaaagtttgttgatggttatgaaagatggatgatgaaaacagccagcaat
ggagctgctgcattccccacctttgatgcaactctcgtgaaagatatacctactggtgga
ggagggaaagggcgcaagaaatcaactgctgaagatgagggcaatgcctcagacaaagga
gaggatgacccagaagaagagggggaaaggaaggcaaaagttggaccgagcaaaagagct
ggtgatgatgacgacgaagaaggcccagctggaggtgattttgatgatgatgatgacatt
gagaaaggtgatgactgggagcatgaggaaatttttactgatgatgatgaagctgttggt
aatgatcctgaggagcgggaagacctgctggctccagaactccctgcacccccagagatt
aagcaggatgatgatgatgatgatgctaatgaagaggagggaggattgagcaaatcagga
aaagagctgaaaaaattacttggacggtccaacgggcttaatgattctgatgcagatgaa
gaggatgacaaaagaaagaaagatgaagaggatgatgatgatgaagatgaagaagatcgc
ccttctcctgttttagctccaaagttgaaggaccctaaagaagaagcagcagatagcagc
cctgtaaaaccagttcctggaggatcttctcgggcaactccttccacaaaatcagcaaaa
ggaaagaggaagaatggggatgatacaaaacctactagtggtgctcctcaaaagaaggta
aagactgaaaatgatgtgaaatcaaccacaaaggataatgcatcaaaaaatgttgcggtc
cccaaagctatgccttcatcattgaaggctagtacaccggttcaaggtacacctgctcaa
gggcctgtggcagaagaggaaattagagctgtattattgcaaagaactcaaataaccact
aatgatcttgtggcagtcttcaaagcaagactaaagacatcagaggacaagagagcgttc
gcggaaattttgaagaaaatctcaaggattcagaagtgcgataacaagaattatgtcgta
ctaaggagcacatag
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