Beta vulgaris (sugar beet): 104883401
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Entry
104883401 CDS
T03548
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvg03009
]
104883401
Enzymes [BR:
bvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104883401
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
90S particles
Helicases
104883401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DHX37_C
HA2_N
DEAD
HA2_C
AAA_22
AAA_19
nSTAND3
ATPase
Cas3-like_C_2
T2SSE
Motif
Other DBs
NCBI-GeneID:
104883401
NCBI-ProteinID:
XP_010666226
UniProt:
A0A0J8B5J0
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Position
Un
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AA seq
1124 aa
AA seq
DB search
MDDEVNYETRVDTYTTNSVGDSPFPGCENVTTLIHVSRPKDVESGRMELPIIMKEQEIME
TINNNVTVIISGGTGCGKTTQIPQFLYEAGYGSGKCPMRSGIIGITQPRRVAVLSTAKRV
AFELGLQLGKEVGYQVRHDRSVGDNCSIKFMTDGILLQELKSDFMLRHYSVIILDEAHER
SLNTDILVGMLSRAVKFRQEEAEKQQQDGIEKYKPNDRIYPIKLILMSATLRVEDFTSGK
RIFPLSPPVINIPGNQFPVTKHFLKKTELIDYIGEAYKKVLKIHKLLPPGGILVFVTGQR
EVKLLCHMLRQASMKFVSRSSEVNEESEATKVTGTVVIGGYNLKNSDEVLNTVSSSNNKQ
QMDRFSCYDECRDKLDKNEAYFALTSEEDSESDIGSDFEDDGSDNGDAYFAVSSGEDSEL
DIGSDFEVHKSCKVANNIVDITEAVNSESLRAAFENLTEKSASSSDYNRNEKISATQDVC
SCQPSSLTKQNADRKGPLIGPLDVLPLYAKLPEAAQLRVFEKIKEGERRVVVATNVAETS
LTIPGIQYVVDTGREKVKEYNPSNGVESYRIKWTSKASASQRAGRAGRTGPGHCYCLYSS
AAFTNLFPDFSTPDILKMPLDYAVLLLKSMGIGKVAKFPFPTPPDAEALGEAQSRLMYLG
ALDSKCRVTPLGKTMAQYPISPRHSRLLLQAIQLSKEKRGSVRPNLVLGYAVAAATALSV
DSPYSFRYEGSQTNTEDQDKEHESGFLGSQKSRDQHAKSMMKQMRESANCCSATFAKPKS
DALTVAYTLQLFEQSRNRTQFCKENTLNLKIMVELSKLRKQLLNIVFKERNQRVQPEFSW
SHGTIKDVEDNWAVASDKYPLSQKEENILCEAICAGWIDMVAKRTSARESSDGDRKVNAI
RYQASSMAKGTVFLGHWSSVHEAPPEFLVYHELNCTKRPYIYRATSVNPEWLAKLSGPLL
CKYLAPSTNQKPVYDPHCDQVFNHVIPYFCRHMWELPPDKVPIEDDEERTKVFAYALLDG
QVLPCLKIVKNVLVSLPSIILKPEALGQKRVSNLISKLRGRTIDSFAELKEAWKEDSLYL
YLELLDFFKKDSRLLFDKLWGIMHKEAFSVPQGRTRKRKRGNRG
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagtaaattatgagaccagagttgatacttacacaacaaatagtgtaggt
gatagtcctttcccaggatgtgaaaatgttactactctcatacatgtttcacgaccaaaa
gatgtggaaagcgggcgaatggagcttccaataattatgaaggagcaggaaataatggaa
actataaacaataatgttactgtgattatctctggagggactgggtgtggcaagaccact
caaattcctcagtttctttatgaagctggctatggttcaggaaaatgccctatgagaagt
ggtattataggtataacccaacctcgtcgtgttgctgtgctctctacagcaaaacgagta
gcatttgagcttggactacaacttggtaaggaggttggctatcaagtcaggcacgacaga
agcgttggagataactgctccatcaaatttatgactgatgggattctgcttcaagaactg
aagagtgattttatgttgaggcattactctgtcataattttggatgaggctcatgaaagg
agtttaaacacagacatacttgttgggatgctttctcgtgctgttaagtttcgccaggaa
gaagctgagaaacagcagcaagatggaatagaaaaatataagcctaatgatagaatatat
cctataaagttgatcttgatgagtgctaccttgcgggttgaggatttcacttcagggaaa
cggatattccctttatccccgccagttataaacatcccaggaaatcagtttcctgtgaca
aaacatttcttaaagaaaacagagctcatagactatattggtgaagcttataagaaagta
ttaaaaattcacaagctgctacctccaggtggcatattggtgtttgttactggccaaagg
gaagtaaagcttttatgccatatgcttcgtcaagcttcgatgaaatttgtatccagaagt
tctgaggttaatgaagagtctgaggcaactaaagtgactggcacggttgtaatcggtggg
tataacttgaaaaatagtgatgaagtccttaatactgtttcaagctccaataataaacaa
caaatggacaggttcagttgctatgatgaatgtcgggataaattagacaaaaacgaggcg
tattttgctctcacttcggaggaagatagtgaatcagatattggaagtgatttcgaagat
gatggatcagacaatggggatgcatattttgccgttagttctggggaagatagtgaattg
gatattggaagtgattttgaagttcacaagtcttgtaaagtagctaataacattgttgat
attactgaagctgtgaattctgaatcattgagggctgcttttgagaatttgacagaaaag
agtgcttcatcatcagattacaacagaaacgagaaaatttctgcaacccaggatgtttgc
tcttgtcagccttccagcttgactaagcaaaacgcagatagaaagggtcctctcattggt
ccattagatgttttgcctctttatgctaagcttccagaagcagctcagcttcgtgtgttt
gagaaaattaaggaaggggagcgtcgagttgttgttgctaccaatgttgctgagacctct
ttgacaatccctgggatacaatatgtggttgacactggaagggaaaaagtgaaggagtat
aatccatctaatggtgttgaatcatatagaattaagtggacaagtaaggcatcagcttct
caacgtgctggaagagcaggaaggacaggacctggtcattgttattgcctctattcttct
gcagcctttactaatctgtttccagacttttcaactcccgatatcttgaaaatgcctctt
gattatgctgttctccttttgaaatctatgggaatcggaaaggttgcaaaattcccattc
ccaacccctccagatgctgaagcgttaggggaagcacagagtcgcttaatgtatcttgga
gcattggatagtaagtgtagggtgacacctttgggcaagacaatggctcagtatccaata
agcccacgacattcgagattgctcctgcaggccatacagttgtcgaaagaaaagaggggt
tctgtacgaccaaatctggttctgggttatgcagtggctgcagctaccgccttgagcgtt
gacagtccttattcatttaggtatgaaggaagtcaaaccaatactgaggaccaggataag
gaacatgaatctggttttttgggaagccagaaaagcagagaccagcatgctaaatcaatg
atgaaacaaatgagagaatctgctaactgttgttctgcaacatttgccaagcctaagagt
gatgctttgacagtagcttataccttacagctttttgagcagtctaggaacagaactcaa
ttctgcaaagaaaacacactgaaccttaaaattatggtagaattgtccaagctgagaaag
caactactaaatatagtcttcaaagagagaaatcaaagggtgcagccagagttttcatgg
tctcatggaaccataaaagacgtcgaagataattgggcagtagcttctgataagtatccc
ctctctcaaaaggaggagaacatcttgtgcgaagctatatgtgctggttggatagatatg
gttgccaagcgcacaagcgccagggaatcatcagacggagatagaaaagtcaatgccatt
cgctatcaggcatcatcgatggctaaaggaacagtttttcttggtcactggtcatctgtc
catgaagcacctcctgagtttttggtgtatcatgagttgaattgcacgaaacggccatac
atttacagagcaacgagtgtgaatccagagtggctggcgaaactttctgggcctttatta
tgcaaatatttagcaccttcgacaaatcaaaaacctgtttacgaccctcattgtgatcag
gtattcaatcatgtgattccatatttctgtcgtcacatgtgggaactcccgccggacaaa
gtgccaatagaagatgatgaagaacgtactaaagtctttgcctatgctttgcttgatggt
caagtcctaccttgcttaaaaattgtgaagaatgtattagtaagcttgccgagcatcata
ttgaagccagaagcattgggtcagaaacgagtgagcaatcttataagcaagttgaggggt
agaacaattgatagctttgctgagctgaaagaagcatggaaagaagattcgctatatttg
tatctggaattgctcgacttttttaagaaagattcgcgcttgctgtttgataagttgtgg
ggaattatgcataaagaagctttctcggtacctcagggtagaaccaggaaaaggaagcgc
ggtaataggggttga
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