Beta vulgaris (sugar beet): 104883843
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Entry
104883843 CDS
T03548
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104883843
Spliceosome [BR:
bvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104883843
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
DUF5798
Motif
Other DBs
NCBI-GeneID:
104883843
NCBI-ProteinID:
XP_019103002
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Position
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AA seq
337 aa
AA seq
DB search
MAVGSIDGLDEHLLNELVARGSLDFDAWTTLISSVEQMYHDDIDKISLVYDSFLSEFPLC
HGYRKKYAEHTTHLCSAERVVRIFERAVEAVPYSVGVWVDYCSFDISSFEDPLDVCRLFE
RGLSFIGRDYLCYNLWDKFIEFEYSHEHWNSLASIYIQTLKFPTKKLHHYYESFKKLVAI
WKENMQYQGGSRKEKQPEHDMNIEVVASEDAEISDVINDLLEPSTRTIALQKYISVGEQF
YQRAYDLDAKVHKFEQNIHRPYFHVKSLDDNQLHNWPQYLDLVEVEGDFDWAVKLYEKCL
ISCAHYPEFWMHYVNYAESKGGREIATDALERATHIF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaggctctattgatgggttggatgaacatctgctcaatgaacttgttgctcgg
ggttcattggattttgatgcttggactacgctcatctcgagtgttgaacaaatgtaccat
gatgatatagataaaatcagtttggtatatgactcgtttttgtccgagttccccctctgc
catggataccggaagaagtatgctgagcatacgacacacttatgcagtgcggaacgtgtt
gttcgaatctttgaaagggcagttgaagcagtgccatattctgttggtgtatgggttgac
tattgtagcttcgatatctcgtcttttgaggatccattggatgtttgcaggttatttgaa
agagggctatcttttattgggagggattatctatgctataatctatgggataaattcatt
gaatttgagtattctcatgaacattggaattctttggcaagcatctatatccagacatta
aaatttccaacaaagaagttacatcactattatgaaagtttcaagaagttggttgccatt
tggaaagagaatatgcaatatcagggaggttctcgaaaggagaagcagccagaacatgat
atgaatattgaagtggtggcatctgaagatgctgaaatttctgatgttataaatgacttg
ttagagccatccactagaactatagcgttgcagaaatatatttctgttggagaacaattt
tatcaaagagcctatgatttggatgcaaaagtgcacaagtttgagcaaaacatacatagg
ccttattttcatgtgaagtcgcttgatgacaatcagctgcataattggcctcaatactta
gatctagttgaggtggaaggtgattttgactgggctgtgaaactatatgaaaaatgctta
atttcttgtgctcattaccccgagttctggatgcattatgttaattatgcggagtctaag
ggaggaagggaaatagcaactgatgctttggagagagcgacacatatcttttag
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