Beta vulgaris (sugar beet): 104883995
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Entry
104883995 CDS
T03548
Name
(RefSeq) serine/arginine-rich splicing factor SR45
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03013
Nucleocytoplasmic transport
bvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104883995
03015 mRNA surveillance pathway
104883995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104883995
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104883995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
YHR127W_C
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104883995
NCBI-ProteinID:
XP_010666880
UniProt:
A0A0J8DY24
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Position
Un
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AA seq
402 aa
AA seq
DB search
MAKPSRGRGASPSGSSSSRSRSRSFSGSDSRSASSRSPSRSRSRSRSFSSSSSPSRSVSS
RSASPSASPPLQRKSSAEPAKRARSPLPQAKKASPPRKPSTLPESKVLYINKLTRNVNEG
HLKEIFGNFGEVVNVELAMDRIVNLPKGYAYVEFKTRADAEKAQVYMDGAQIDGTIVVAQ
LTLPPSEKVSPAKAVAPPPKKDVAKTDGVDAGKDGPKRGREASPRPRRSPVARRGGSPRR
MDPPPRRRGDSPVRRESPYRRGESPKRRRPISPRGRSPSPLRRPRSPLRGSPRRVRGSPV
RRRSPLPPRRRSPPPRRPRSPPRRSPVSRRRSPVRRVGRSRSRSASPRRRPPIRRGRSSS
GSPSPSPKRGPRRISKSPKRPLKGRSKSSSRSRSSSGSPRKP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaagccgtggtcgaggagcatccccatctggctcatcttcttctaggtca
cgctctcgctccttctccggctccgattctcgcagcgccagctctcgttcgccttctcgt
tctcgttctcgctcacgctctttctcctcctcttcttctccttctcgcagtgtcagctct
cgcagcgccagccctagtgctagccctcctcttcagcgtaaaagttctgctgaaccggca
aagcgagctcgttctccactgccacaggctaaaaaggcttctccccctaggaaaccttca
acacttccggagtctaaggttctttacataaacaagctcacaaggaatgtgaatgagggc
catctcaaagaaatttttggcaactttggagaagtagtaaatgttgagcttgctatggat
cgcattgtcaatcttcccaaaggatatgcatatgtggaattcaagacaagagctgatgct
gaaaaggcacaagtgtacatggatggagctcaaattgacgggactattgttgtggcacaa
ttaactttaccacctagtgaaaaggtatcacctgcgaaagctgtggctcctcctcccaaa
aaagatgtggccaaaactgatggtgtagatgctgggaaagatggaccaaaacgcggaaga
gaagcttctccacgtccgaggagatctcctgttgctcgtagaggtggttcacctagaagg
atggatcccccacctcgtcggcgtggagattctcctgttcgtagagaatctccttatcgt
agaggtgaatcgcctaaaagaaggcgccctatatctccgagaggccgatctccatctcca
ctgaggcggccaagatcacctctgaggggttctccacgaagggtgcgaggaagtcctgtt
cgtagacgctctcccttacccccacgacggcgttcaccacctcctagacgacctcgaagc
cctcctagaagatctcctgttagtcgtagacgctctcctgttcgtagggttggccgttca
cgctcaagatcagcctcaccacggagaagaccaccaatcagaagaggaagatcatcttca
ggctctccctcgccgagtccaaaaagaggtcctaggagaatatcaaaaagtcccaagagg
cccttgaaggggaggagtaagagcagtagtcgaagtcgaagcagcagtggatcccctcgt
aaaccttga
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