Beta vulgaris (sugar beet): 104884305
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Entry
104884305 CDS
T03548
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104884305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvg04121
]
104884305
Enzymes [BR:
bvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104884305
Ubiquitin system [BR:
bvg04121
]
Ubiquitin ligases (E3)
HECT type E3
104884305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
104884305
NCBI-ProteinID:
XP_010667232
LinkDB
All DBs
Position
Un
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AA seq
1588 aa
AA seq
DB search
MGDSITESRGQKRSEIPEELPADKRACSSLESRPSSSTVSPETLVDSTTRAFEMREGDRE
TSSSSASASGHSEGDGERDSPYGSCDSDDMDDDNDDDHRFDSLREIQRSRSHNDSTKYDG
IMCSLSNDAEPSGQLASLTELCELLSFSTEDSISSLLTDRFASALVKLAKHEDNPDIMLL
AIRALTYLCDVLPRSPSSLVRHDAVPALCQRLIVIEYLDVAEQCLQALEKISRDQPLVCL
QSGALIAVLGYIDFFSTTVQRTALRTVVNICKALPSECPSSVMEAVPRLCDLLQYEDQQL
VELVATCLIKVADCVKGSPGKLSELYGHGLINRATHLIDINSRITLSQSTYTGLVGLVAK
IASGSADAVRSLFELSIGRIMKDILSNSDVSHGTPSPRIVDNNCTQVHEILKLLHELLPE
VSRDKKEEILSSTERILLDQPHILQEFGLDILPTLVQVVSSGANLYVCYGCLSVINRLVY
FSNPETLQKLFEGINIASFLAGIFGGKDHHILLLALQITETVLEKLSNILMPSFIKEGVL
FAIDNLLMPDSCSQPTFPMINSNQSKKIAGREVMGCLCYTYHTGHSDSTLDSKSCKAKKD
SVHSLAEHMKMKYFVIEPHSSQSMVTDLLQDLRNASIAINDLLNTSPDTEASANSEERLC
SILDKVILQVGGSVPVSTFELIESGIIKALLNYLSNGQFLSSSYIHNDLSHAYGVQKRLE
AFAKISLSSPDPASQDLPLLLLVRKLHSALLTVETLPVIAGFPTRQRGSYATVPGGRYTA
YPCLKVRFVRGEEELCLGEYSKNAVSVEPFCPVQEIEQHLRSKVGQAKMESSEASIQATL
EEKTKSIQVPLVAASLPDKSAEHLGSGSTCTVLPDLQEDGDDRSHSSAMDISDLGGTTVV
GAEATSEVESRCPAEEMQASDATENLIETSSTSLGAGGDNEISKKSHSRASFNNVEIPSK
LALYLDGEQLEYSSTLYQEILQRRLNGSKLWSSTYTVTYRRVAGNETSSNKEGRDIYDNC
VTDKVFLRQQVMPLFSSIFAHGFGPKSNLSSTSSDILLLLRSLEMMNRVSYHLVSHERMN
AFAEGRLDNLDLLNVALPTLSQNEFVSSRLTEKLEQQMRDPSAVHVGAMPLWWNQLIATC
PFLFSFETRCKFFQLAAFGRVHILPSSMSSQSDANSSRDRRASAGSPPRKKFMVCRERIL
DSAAQMMDTYAHKKVVIEVEYSEEVGTGLGPTLEFYTLVGHEFQKAGLGMWRGDYMSPTN
SCSQQGSGSRFLVTISGLFPRPWSPASSNINGVEFSDVIKKFVLLGQFVGKALQDGRVLD
IPFSKAFYKLVLGKELSLCDVQLFDPELGRFLLEFKALASRQKHDEFAGEQTVVRADSSR
FRSTKIEDLCLDFTLPGYPDYVLSSGMDDVMVNINNLEEYISLFLDATLQTGVYRQVEAF
KSGLNQVISDKHLQIFTEEELERLLCGERDSWLSGDLFDHIKFDHGYTAGSPPIINFLEV
ITDFTYEQRRAFLQFVTGAPRLAPGGLAALKPKLTIVRKHSSNCPDSDLPSVMTCANYLK
LPPYSSKEKMKEKLLYAITEGQGSFHLS
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgggggatagtataacggaaagtaggggccaaaagcgatcagaaatccctgaagaattg
cctgcagataagcgggcatgtagttctttggagtctagaccaagttcatctactgtgagc
cctgaaacacttgttgattcgactactagagctttcgagatgcgtgaaggtgatagggag
acttcatcttcatcagcttcggcctctggacattcagagggtgatggcgagagggattct
ccatatgggtcttgtgattctgatgatatggatgatgataatgatgatgatcatcgattt
gacagtcttcgcgagattcaacgtagtcgatcacataatgacagcacaaaatatgatgga
ataatgtgtagtttgagtaatgatgctgaaccttctggacaattagcatctttgactgaa
ctgtgtgaacttctttcattttctactgaagattcaatatcgagcttgctaactgatcga
tttgcttctgctcttgttaagttggcaaagcatgaggacaatccagatattatgcttttg
gctatcagggctttaacttatttatgtgatgttttaccacggtcgccgagttcacttgta
aggcatgatgcagttcctgctttgtgtcagagattgattgtcattgagtatcttgatgta
gctgaacaatgtttacaagcattggagaaaatatctcgtgatcagccacttgtatgcctg
caatctggagcgttaattgctgttttaggttatatagatttcttttctactactgtacag
agaactgcacttcgaactgttgtcaatatatgtaaggcgctaccatctgaatgtccttca
tctgtcatggaggcagttcccagattgtgtgatcttttgcaatatgaggatcagcagctc
gtggagcttgtagccacttgcttgatcaaagtagcagactgcgtgaagggttctcctggg
aaattgtctgagctttatggtcatgggcttattaatcgagccacgcatctcatagacatt
aacagtcgaatcactttaagccaatctacatacactggtctagttggactagttgccaaa
attgcatctggatcagctgatgctgttagaagtcttttcgagctgagcattggcagaatt
atgaaggatattttgtcaaattctgatgtttctcatggaacaccttcccctcgcatagtg
gacaacaattgcactcaggtgcatgaaatactgaagttgctacatgagctgcttcctgaa
gtatccagagataagaaggaagaaatcttgtcaagcacggaaagaattttgttagatcag
cctcatatactgcaggagtttgggttggatattcttcctactttggtgcaggtggttagc
tctggtgcaaatttatatgtctgctatggatgcctttcagttatcaatagattagtttat
ttcagcaatccggagactcttcagaaattgtttgagggtattaacattgcgagctttttg
gcaggaatcttcggtggaaaagatcatcatattctgctattagctctacagatcactgag
acggtcctggaaaagctttctaatatcttaatgccttctttcatcaaagaaggcgttctc
tttgcaattgataaccttctcatgccagatagttgttcacagccaacttttcccatgatc
aacagtaaccaaagtaaaaagattgctgggagggaggttatggggtgcttgtgctatacc
tatcataccgggcactcggactccactttagattctaaatcatgcaaggctaaaaaagat
tctgttcatagccttgccgagcatatgaagatgaagtacttcgttatagaaccacatagt
tctcaaagcatggtgaccgatttgcttcaggaccttaggaatgcctcgatagcaataaat
gatcttctaaacacatccccagacactgaagcaagtgcaaacagtgaagagagactctgc
tctattttggataaagtcatacttcaagtcggtggaagtgtacctgtctcaacatttgag
ctcatagaaagtggtatcataaaggcattattaaactacctatctaatggtcagttttta
agcagctcctatattcataatgacctaagtcatgcttatggtgtacaaaagagattggag
gcctttgcaaaaatatctttgtcttcccctgatccagcctcacaagacttgcctttatta
ctgctagtgagaaaattacacagtgccctattgactgtggaaacattgcctgttatagca
ggctttccgaccaggcaaagaggttcttatgcaactgttcctggtggacgttacactgca
tatccatgtctcaaagttcgctttgtgaggggagaagaagagttgtgcttgggtgagtac
tcaaagaatgctgtgagtgttgagcctttttgccctgtacaggaaattgaacagcacttg
cggtccaaagtaggccaagcaaagatggagtcctcagaagctagtattcaggctaccctt
gaagagaaaactaaatctattcaagttcctctcgttgctgcatcccttccagacaaaagt
gctgaacatctgggatcagggagcacatgcactgttttgcctgatctgcaggaagatgga
gatgatagatcacatagctcagcaatggacatatctgatttgggagggacgacagttgtt
ggagcagaagcaacaagtgaagttgaatctagatgtccagcagaggaaatgcaggcatca
gatgcaactgaaaacctgatagaaactagcagcacttccctaggtgccggcggtgacaat
gaaattagtaagaagagccattctagagcatccttcaacaatgttgaaattccatcaaag
ttggcactttaccttgatggtgagcagttagaatattcgtctaccttataccaagaaatc
cttcaaagacgattaaatggttccaaattgtggagttctacctacactgtaacatatagg
agagtagcaggaaacgagacgagcagtaataaggagggtagggacatctatgacaattgc
gtaacagataaagtttttctacgccagcaggttatgccacttttctccagcatatttgct
catggatttggtcctaagtcgaacttgtcaagtacttcaagtgatattttattgctcctc
agaagtttggaaatgatgaacagggtttcgtatcatttggtttctcatgaaagaatgaat
gcttttgctgaaggtagattagacaatttggatctgttgaatgtggcacttcctacactg
tcacagaatgagtttgtgagcagcagattgacagagaaattagaacagcagatgcgggat
ccttcagctgtacatgttggtgccatgccattgtggtggaatcagttgattgccacatgt
cctttcttatttagctttgagacaagatgcaagttctttcagttggcagcatttggtaga
gtgcacatcttacctagtagtatgtcatctcaaagtgatgcaaattcatctagagatagg
agagcttctgctggtagtccacctcgtaagaagttcatggtttgtcgagaacgtatttta
gattcagctgctcaaatgatggacacctatgcacataagaaggtagttattgaggtggaa
tacagtgaagaagttggtacaggtcttggtcccacactggaattttacacattagtgggt
cacgagttccaaaaggctgggttgggtatgtggagaggtgattatatgtcacctactaac
agttgtagccagcagggttccggttccagatttttggttaccatttcaggactttttcct
cgcccttggtcaccggcatcaagcaacataaacggggtagagttttctgatgttattaag
aagtttgtcctcctagggcaatttgtaggcaaggctcttcaggatggaagagttttggat
attcctttttccaaagcattttataaacttgttctggggaaggaactctctctgtgtgat
gttcaattatttgatcccgagctcggaagatttttgctggagtttaaggctctcgccagc
agacaaaaacacgacgaatttgctggtgagcaaactgttgtgcgtgctgatagttcgagg
ttccggagtacgaagattgaagacttatgccttgattttacgctccctggttatcctgat
tatgtcctttcctctgggatggatgatgtgatggtcaatatcaataacttggaggagtat
atttctttatttttggatgctacattacaaactggagtatatagacaagtggaagctttt
aaatcaggattgaatcaggtaatatcggataaacatcttcaaatttttactgaggaggag
cttgagcgattgctctgcggagaacgcgattcttggctttcgggtgacctgtttgatcat
atcaagtttgatcatggatatactgctggaagtcctccaatcatcaatttcttggaggtt
atcactgatttcacctatgagcaaaggcgcgcttttctccagtttgtgactggtgctccc
cggctagctcctggcggtttggctgctcttaaaccaaagctaacaatcgtgcgcaagcat
tcaagcaactgtcctgattcagacttgccgagtgtgatgacatgtgctaattatctgaag
ctacccccatattcgtcaaaggagaaaatgaaagagaagctcttatatgcgataacagaa
gggcaaggttcatttcatctgtcatag
DBGET
integrated database retrieval system
