Beta vulgaris (sugar beet): 104884428
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Entry
104884428 CDS
T03548
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104884428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104884428
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104884428
U7-dependent histone pre-mRNA processing factors
104884428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
RRM_10
DUF8400
CATSPERE_NTD2
Motif
Other DBs
NCBI-GeneID:
104884428
NCBI-ProteinID:
XP_010667375
UniProt:
A0A0J8B6A4
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MASSQQHRCVFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEE
TALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLATSADAQKQVGGPAVIG
DATFHQPIGLPIAMTAASVMAGALGGPQTGQINQNGVQNQSLVGSDPLTHHLAKMSRSQL
NQVIHEMKVLSMQNKDLARQLLLVSPQLPKVLFQAQIMLGMVTPQMLQMPNIRQQAPNPT
VSTPQPSMQLTMQGQPPVVQTLPGLPSFTPLSSVSQNALAHNQFLAPLPLHPQARAQHPN
LNQMVTPSQSVLPAHSGPQPLLSARPQPLGGLQRPPVSSSFRPGPPLQHAGHASMTTTQN
TNLQALSQSHPVSSDPGYQVVSSVRAASVEAIRKDAPMRVQTVGDATLVKGTNTLTNLAS
LSDKKDSQDLMVRPSKLRKLDNDKGASFSSAGLVAPSATVTASSSVAAFQSSKLEAQNME
KQALQLPPDVESALLQQVLNLTPEQLSSLPPEQQQQVIQLQQMLR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcccaacaacatcgttgcgtttttgttggaaatataccttatgatgcaact
gaagaacagcttattcaaatctgtgaagaggttggccccgtagtttcattcagattggtt
atagaccgtgaaacaggaaagccaaaaggttatggattttgtgaatataaggatgaagaa
acagcacttagtgctcgccgtaatcttcagggttacgagattaatggtcggcagctgcgg
gtagattttgccgaaaatgacaaaggtgctgatagaaatcgtgaacagggtcggggtggg
ccaggattggctacaagtgctgatgctcaaaagcaggtaggtggcccggctgtcattgga
gacgcaacattccatcagccaattggcctcccaatagctatgactgctgcttctgtcatg
gcaggagctctcggtggtcctcagactggtcagataaatcaaaatggtgtgcagaatcag
tcattagttggcagtgaccctttaacgcatcatctagccaaaatgtccaggagtcagctg
aaccaagttatacatgaaatgaaggtgctttctatgcaaaataaggatctcgcacgtcaa
cttttgcttgtgagcccacaacttccaaaagttcttttccaggcacagataatgttgggt
atggtgacaccacaaatgttgcagatgccaaatataaggcaacaggccccaaatccaact
gtttcaactccccaaccttctatgcaacttaccatgcaaggtcaaccccctgttgttcaa
accctacctgggttgccctcttttactccattatcctctgtgtctcagaatgctttggca
cataatcagttcttggcacccttgccactgcatccacaagcgcgagctcagcatccaaat
ttgaaccagatggtgacaccatctcaaagtgtactacctgcacattctgggcctcagcca
cttctatctgcacgtcctcaacctctgggtggattgcaaagaccaccggtatcttcctct
tttagacctggtccaccattgcagcatgcaggacatgctagtatgacaaccactcaaaac
acaaatcttcaggctctctctcaaagccaccctgtgtcatcagatcctggatatcaggtt
gtctcttctgttcgcgcagcttccgtggaggcaattaggaaggatgctcccatgcgtgta
caaactgttggagatgcgaccttggttaaaggtactaacaccttgacgaacttggcgtcg
ttatctgataaaaaagattctcaagatctgatggttcgtccttcgaaacttcggaagttg
gataatgacaaaggtgcttccttctcatctgctggattagttgcaccaagtgccactgtc
actgcaagtagctctgttgcagcttttcaaagctctaaactggaagcgcagaacatggag
aagcaagccctgcagcttccacctgatgtggagtctgccttgttgcagcaagtgctcaac
ctaacacctgaacaactgagttcactacctccagaacagcaacagcaagtcattcaacta
cagcagatgctcagatga
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integrated database retrieval system
