Beta vulgaris (sugar beet): 104885113
Help
Entry
104885113 CDS
T03548
Symbol
LOC104885113
Name
(RefSeq) LOW QUALITY PROTEIN: probable galacturan 1,4-alpha-galacturonidase SALK6
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Module
bvg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104885113 (LOC104885113)
Enzymes [BR:
bvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104885113 (LOC104885113)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
104885113
NCBI-ProteinID:
XP_048504592
LinkDB
All DBs
Position
1:48143850..48146253
Genome browser
AA seq
415 aa
AA seq
DB search
MASKLNFTLCLLGFYLLIIEVSCQTQNLAPGDTIVFDITTKGAKPDADVTQAFLDSWTAA
CASKKPSKVLVPAGNYILGAITLKGPCQTPTVIEILGNFKAPSDVAAFKKEDSWFKVENV
DSLIIISGKGGGVFDGQGQAGWKKNECTKNANCAFDLPYNIRFNFVSNSKVSGLTSLNSK
SFHVVLLGCKQLELSDMTITXPADSPNTDGIHIGRSENIIVRGWTIGTGDDCVSFGDGAK
NVLIEGVTCGPGHGLSVGSLGKYPNEEPVSNITIRKCTIKNTDNGVRVKTWHNSYESTVT
GLYFEDITVENVRNPVIVDQEYCPWNHCKAKTPSKVKISDIRFKNVKGKSSTKEAVKLIC
SEXAPCDKVELADIDIQYTGPDGPAVSMCKFVKPLLTGKQSPPACDAPATPIVET
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaattaaatttcacattgtgtttgctcggattttatttgctcatcatagaa
gttagttgtcagactcagaacctagctcctggtgataccattgtatttgacataaccacg
aaaggtgcaaaacctgatgccgatgtcacacaggcttttttggactcatggactgcagca
tgtgcatcaaaaaaacctagcaaggtcttagttcctgcaggaaattatatcctaggagcc
attactctcaaaggtccatgccagacaccaactgtaattgaaatcttagggaacttcaag
gctccttcagatgtggcagcttttaagaaggaagattcatggtttaaggtagaaaatgtc
gacagtttgataatcattagtggtaaaggaggaggtgtttttgatggccaaggacaagca
ggatggaaaaaaaacgaatgtactaagaatgctaactgcgccttcgaccttccttataac
ataaggttcaattttgtgtccaactcaaaagtaagtggcttgacttcgctaaacagcaag
tcgtttcacgttgttctcttagggtgtaagcaactagagttgtcagacatgacaataacc
ccagcagacagccctaacacggatggcattcacattggacgttcagaaaacattatcgta
agagggtggacaataggcaccggagatgattgcgtgtcttttggtgatggggctaagaac
gtccttatagaaggagtcacatgtgggcccggtcatggtctcagtgttgggagcttgggt
aaatacccaaatgaagaaccagtttcaaatattactatcaggaaatgtaccatcaagaac
actgacaatggtgtccgggttaaaacatggcacaactcttatgaatccactgtcactggc
ttgtattttgaggatatcactgttgaaaatgtcagaaatcctgtcattgttgatcaagaa
tattgcccgtggaatcattgcaaagcaaagacaccatcaaaagtcaagatttccgacatc
agattcaagaatgtgaagggaaaatcaagcaccaaggaagcagtgaaactgatttgcagc
gaggcgccatgcgataaggtagagctagctgacatagacatacaatacactggaccagat
ggtcctgcagtatcaatgtgtaaatttgtgaagcctcttcttactggaaagcagagtcca
cctgcttgtgatgcacctgctacccctattgttgaaacttga
DBGET
integrated database retrieval system
