Beta vulgaris (sugar beet): 104885303
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Entry
104885303 CDS
T03548
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104885303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104885303
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104885303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104885303
NCBI-ProteinID:
XP_010668302
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Position
2:complement(10380958..10389983)
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AA seq
242 aa
AA seq
DB search
MEVDRVDGRTPTMLRPLACSINVLNRAHGSASWSQGDTKVLAAVYGPRAGTKKNENPEKA
SVEVIWKPKTGQVGKLEREYEMILKRTLQSICILTVNPNTTTSIIVQVVNDDGALLPCAI
NAACAALVDAGVPLKHLAVAICCCLAETGCVILDPTKQEEQEMKAFVYLVFPNSMLSVLQ
GSSHTDDEPMEHGIITSVTHGAMSVEDYFDCLKIGCAATAKLSGFLRSRLQNRLPSDLLG
DN
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgacagagtagatgggcgtacgccaaccatgttgagaccgttggcatgttct
ataaatgtcctcaatcgtgctcatggatccgccagttggtctcaaggggataccaaggtt
ctagctgcagtttatggaccaagagccgggactaagaagaacgaaaacccggagaaagct
tcagttgaagttatttggaaaccaaaaacagggcaagttgggaaattggagagagagtac
gagatgatattgaagagaacattacagagcatttgtatattgacagtcaatcctaatacc
accacttctataattgttcaggttgtcaatgatgatggtgctcttcttccttgtgcaatt
aatgctgcttgtgctgcacttgttgatgctggagttcctctgaagcatctggctgttgcg
atatgttgctgtttggctgaaacaggatgtgtcatattggatcctacaaaacaagaagag
caggaaatgaaggcatttgtctatttggtttttcccaattccatgttgtcggttctacaa
ggttcaagccatacagatgatgaaccaatggaacatggaatcatcacatctgttactcat
ggagcaatgtcagttgaagattattttgactgtctcaagatcggatgtgcagcaacggca
aaactctctggttttctaagaagtcgcctgcaaaatcggcttcctagtgacttgcttggg
gataattga
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